Gene Information

Name : PSPTO_0938 (PSPTO_0938)
Accession : NP_790777.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2301
EC number : -
Position : 1016263 - 1017213 bp
Length : 951 bp
Strand : +
Note : see PMID:20190049 for expression data; similar to GP:15978391, and GP:15978391; identified by sequence similarity; putative

DNA sequence :
ATGGCCTTATTCTCGCCTTACGCGCTGGGGGCAACGTTGTACATGCCCGCTACCCGGGACGACATCGTCGATGTGGTGTT
CGGCGAAAAGATTCCCGAGCTGCGTTCGCTGGTTGTCTGCCTGGAAGATGCGGTCGCGCTGATCGATGTCGACACCGCAT
TGCTCAACCTGCGCCAGGTGCTGACCCGCATCCACGATCGGGGCGGTCGTCCGGCCAATGGCCCGCTGCTGTTCGTTCGC
CCGCGTGATGCGGCGATGGCGCGTATTCTCAACGACTGGCCGTTGATGGCCCACGTTGACGGGTTCGTTGTCCCCAAGCT
GTCGCTGAAAAGTCTGACGAGCTGGGAGGAGGCGGTTACCAACCCTGCGCTGGCATTGATGCCTACACTGGAAACCCCGG
AAGTGTTCAACCCGACGGCTATGGTCGAGCTGGGGCAGGCGCTCAAAGCCAGCCTGCACGAGCGGATCATCGCTCTGCGC
ATCGGTGGCAATGACCTGATGGGCTGCCTGGGCTTGCGCCGCAATCCGGCCATGACCCTGTATTCAACCCCGATGGGTTA
TGTGATCCCGATGCTGGCGGGGGTGATGGGCGCGCAGGGCTTTGCGCTCACCGCGCCGGTGTTCGAACAGCTCGCCACAC
CAGACATTCTGGAACAGGAACTGGCGCTCGATATTACTAATGGGTTGGTCGGCAAGACGGCAATTCACCCCTCGCAGGTC
AATATCATTCAGAATGCACTACGCGTCAGTCTGGAGGACATGAACTCCGCCCGGATGATTTTGAACTCTGTGGCGCCCGC
CGTGTTCAAGTACAACGATGCGATGTGTGAACCGGCCACCCACTATAAGTGGGCAACCCACATCATGGAGCGCGCCAAAT
GGCACGGAGTGTTACCCACACCCGCTTCGATCATGGATGCCAGCATTCGACTCGCTGAGGCAGTTAGCTAG

Protein sequence :
MALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALIDVDTALLNLRQVLTRIHDRGGRPANGPLLFVR
PRDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEEAVTNPALALMPTLETPEVFNPTAMVELGQALKASLHERIIALR
IGGNDLMGCLGLRRNPAMTLYSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILEQELALDITNGLVGKTAIHPSQV
NIIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLPTPASIMDASIRLAEAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACY75548.1 conserved hypothetical protein Not tested Tn6060 Protein 3e-113 77
Z1166 NP_286701.1 hypothetical protein Not tested TAI Protein 9e-68 53
Z1605 NP_287109.1 hypothetical protein Not tested TAI Protein 9e-68 53