Gene Information

Name : PSPTO_0937 (PSPTO_0937)
Accession : NP_790776.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1015169 - 1016263 bp
Length : 1095 bp
Strand : +
Note : see PMID:20190049 for expression data; similar to GP:15978392, and GP:15978392; identified by sequence similarity; putative

DNA sequence :
ATGAGTGATCCCGTTCACGGGCTCGACACGGTCGGCAGCGGCAGTTACCTGAGCGACGACGTGCATTTTCTGTTGCGCAG
CGTCGACATGCAGACCACCAGCGTCGAGGAAAAGGAGCGCCTGATCCAGACGCGGCAAAAGCACTATTCGGAAATGATCA
GCGAGGAATCTGCGCCCAGCGCTGCCCACCAGGCGCTGTACGAGCTGGCGCTCAGCCAGAACGGCGCGCGCATGGCTGCT
GATGTGCAGGCGCTGGCGCACGCGCTTGAGCGTGAATGCGACGGCTCGCCGATCATTCTGGTGTCCTTTGTGCGCGCCGG
TTTGCCGCTCGGTGTGCTGTTGCGTCGGGCCTTGATTGACCTTGATCGCGAAACGCATCACTACGGCATCAGCATTGTCC
GCGATCGCGGCATCGATACCGTAGCGCTGGAGGCCATCATTGAGGCCCACGGCGCGCAGAACATCGTGTTTGTTGACGGC
TGGACCGGCAAAGGCGCGATATCCGGTGAGATTCGCCGCAGCCTGGCGGGCGATACACGTTTTCCCCAGGACCCGCGCCT
GGTGGTGCTCGCCGATCCATGCGGCAGCGCCTGGCTGGCGGCGTCTGCAGAAGACTGGGTAATTCCGTCCGGCATTCTGG
GTGCAACGGTGTCCGGGCTGGTGTCGCGCTCTATCTGGCCGACCGACGGCGGGCTGCATGGTTGCGTGGTCTATGAGCAT
TTGCAGGCGCATGACGTTACACGCGGTTTTATTGAACAGATCGACATCCAGCGTCGTCAGAAAGAAGGTGCGCTGACGCT
GGCACCCTGGACGCCTCAGCAGCGAAGCGAACTCAAGACTGCGGCATCCCGGGTGATCGACACGCTGGCCGAGCGCTTCG
ACGTCAATAACCTGAATCGCGTCAAGCCGGGCATTGCCGAAGCCACGCGGGCAGTCATGCGCCGCGTGCCGGATCACGTG
CTGGTACGCAAGCTGGCTGACAGCGACGTGCAATTGCTGCTGCACCTGACTCAAAAAGCGGGCATCCCCGTTGAAGAAGT
CGGCGATGTCCTGGGCCCCTACCGGGCGGTGACCATCATACGGAGTCTCGGCTAA

Protein sequence :
MSDPVHGLDTVGSGSYLSDDVHFLLRSVDMQTTSVEEKERLIQTRQKHYSEMISEESAPSAAHQALYELALSQNGARMAA
DVQALAHALERECDGSPIILVSFVRAGLPLGVLLRRALIDLDRETHHYGISIVRDRGIDTVALEAIIEAHGAQNIVFVDG
WTGKGAISGEIRRSLAGDTRFPQDPRLVVLADPCGSAWLAASAEDWVIPSGILGATVSGLVSRSIWPTDGGLHGCVVYEH
LQAHDVTRGFIEQIDIQRRQKEGALTLAPWTPQQRSELKTAASRVIDTLAERFDVNNLNRVKPGIAEATRAVMRRVPDHV
LVRKLADSDVQLLLHLTQKAGIPVEEVGDVLGPYRAVTIIRSLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACY75549.1 conserved hypothetical protein Not tested Tn6060 Protein 2e-133 73
Z1606 NP_287110.1 hypothetical protein Not tested TAI Protein 2e-90 52
Z1167 NP_286702.1 hypothetical protein Not tested TAI Protein 2e-90 52