Gene Information

Name : PSPTO_0935 (PSPTO_0935)
Accession : NP_790774.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1013292 - 1014425 bp
Length : 1134 bp
Strand : +
Note : see PMID:20190049 for expression data; identified by Glimmer

DNA sequence :
ATGGACAGCAGCGCAGCTTTTTCCAACCCTACAAAGCTTCGTGCTGATCTGCTTCGTGGTCGCCTCGACGTCAGCGTCGA
TTCGTCCACCATTGCCCCGGATTCACTGTTCGGCTTCGCCGAGCGGCGCAATCCCAAACGCGCGTTTCTGTTCGTTTCGC
GGGTGCTCGGGCGTCATATCCCGGCGCGCCCGAGCGTAATGCTCAAGAGTTTTCAGGACCTGGCGCACAAGATTCCGGTA
GACCTGCCAGGCCCGGTGCTGGTCATCGGTATGGCCGAAACAGCCGTGGGCCTGGGTGCCGGTGTGCACCGTGCCTACAG
CGAAACGCATTCCGATGCGCTGTACTTGGTCAGCACGCGCCATCCAACCGGCACCGAGCTGTTCGCCCGTTTTGAAGAAG
AGCACAGCCACGCCAGCGCGCACTTGATTCACTTGCCTGCCGATCCTGCGCTGCGCGACATGATGCTCGGTGCACGTTCG
CTGGTGCTGGTCGATGACGAAGCGTCGACGGGCAAGACGTTCATCAATCTGCATCAGGCGCTGGTCGAGGCCGGGCTGAG
CAAGATCGAGCGGGTGGTGACCTGCGTGCTCACTGATTGGTCGGCAGGTGCGGTCAGCACGTCGATGGGCGCGGTGGCTG
AGCAGGTGTCGCTGTTGCAGGGCTCGTATTCCTTTGACGAGGACGTCAGCGCGCCGCTGCCGGACATGCCGGAAGTCGGC
ACCGTTGCGATGGGCGACTGGCCGTTGCTGACCGCCAACGACTGGGGGCGCATGGGCGTGCTGGCGGTTGCCGATACGCT
GGCGCCTGGCCTTACGGTAAACAAGGGCGAGCGCGTTCTGGTGGTCGGCACCAGCGAGTTTGTCTGGCGTCCTTTTCTGT
TGGCCGAGCGCCTGGAAAAAGCCGGGGCTGATGTGCATTTCAGCTCCACCAGCCGTTCGCCGATCGCGCTGGGGCATGCC
ATCGATCACGCGCTGTCGTTCTCGGACAACTACGGGCTGGGCATCCCCAACTTTCTTTACAACGTGCGACCGGGTCAGTT
TGACCGAGTGCTGATCTGCACCGAAACCCCCAGGCAGGCCGTCCCCGCCGAGCTGATTGAAGCGCTGAACGCCGAGGTGA
TTTGCGATGAGTAA

Protein sequence :
MDSSAAFSNPTKLRADLLRGRLDVSVDSSTIAPDSLFGFAERRNPKRAFLFVSRVLGRHIPARPSVMLKSFQDLAHKIPV
DLPGPVLVIGMAETAVGLGAGVHRAYSETHSDALYLVSTRHPTGTELFARFEEEHSHASAHLIHLPADPALRDMMLGARS
LVLVDDEASTGKTFINLHQALVEAGLSKIERVVTCVLTDWSAGAVSTSMGAVAEQVSLLQGSYSFDEDVSAPLPDMPEVG
TVAMGDWPLLTANDWGRMGVLAVADTLAPGLTVNKGERVLVVGTSEFVWRPFLLAERLEKAGADVHFSSTSRSPIALGHA
IDHALSFSDNYGLGIPNFLYNVRPGQFDRVLICTETPRQAVPAELIEALNAEVICDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACY75551.1 conserved hypothetical protein Not tested Tn6060 Protein 1e-139 76
Z1169 NP_286704.1 hypothetical protein Not tested TAI Protein 9e-92 54
Z1608 NP_287112.1 hypothetical protein Not tested TAI Protein 9e-92 54