Gene Information

Name : PSPTO_0880 (PSPTO_0880)
Accession : NP_790719.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 951854 - 952603 bp
Length : 750 bp
Strand : -
Note : similar to GP:18077176, and GP:18077176; identified by sequence similarity; putative

DNA sequence :
ATGGCTGACGTTGCCGATCGCGCGAAACAGCAACAAGACCACGAACAGTCTTTCATAGGATCTCTCTTCACCCTGCCCTT
CCGATTCGCGGCAGTAATGTTCCTCTCTCTGGGGGGAGCCATCATCGTCGAATGGATCTGCATGTACTTCTTCTGGCCGG
AGGCCGGTTGGCAGCATGCTCGTGCAATGCTCGATCATGAACTCAGCTGGCTCTCCAAGGGGTTCCTGCAGAGTGTGGTT
GTTCAAGAGCCTGGCCGAACAGCGACATGGCTGGTTCAAACCACGTATGACTGGCTGGTGGTCAAGACGGGGCTTCAGAC
CTGGGTTCAACACACCTCTGATTATGCTGCGACAGGAGAACGATCACGCGGTTTCGACGTGCGATACATGCTCGGCGTGG
GAGTCAGCAAGTTTCAGGATTACGGCCTTGCGGCGCTCTACACGACACTGGTGTTTTGCGTGCGTCTGGTGATCCTGACC
CTCGCAATCCCGTTATTTGTGATGACGGCGTTTGTTGGTTTTGTGGACGGACTGGTGCGCAGAGACTTGCGGCGGTTCGG
TGCCGGCCGTGAGTCCAGCTACCTGTATCACAAAGCTCGAGCAACGATGGTGCCGCTGGTGATCATCCCCTGGAGCCTTT
ACCTGGCTCTGCCATTCAGCGTGAGCCCTTTGCTAGTGCTCCTGCCATGCGCGGCACTGCTCGGCCTGGCGGTCAGCATT
ACGGCGTCCAGCTTCAAAAAATACCTCTAG

Protein sequence :
MADVADRAKQQQDHEQSFIGSLFTLPFRFAAVMFLSLGGAIIVEWICMYFFWPEAGWQHARAMLDHELSWLSKGFLQSVV
VQEPGRTATWLVQTTYDWLVVKTGLQTWVQHTSDYAATGERSRGFDVRYMLGVGVSKFQDYGLAALYTTLVFCVRLVILT
LAIPLFVMTAFVGFVDGLVRRDLRRFGAGRESSYLYHKARATMVPLVIIPWSLYLALPFSVSPLLVLLPCAALLGLAVSI
TASSFKKYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph73 CAI36114.1 hypothetical protein Not tested PPHGI-1 Protein 6e-100 99
RL035 AAP84162.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-62 70
unnamed ABR13374.1 hypothetical protein Not tested PAGI-5 Protein 8e-72 66
EXA46 ABD94655.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-72 66
RL046 AAP84172.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-72 66
ORF SG67 AAN62289.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-41 52
ORF C64 AAN62158.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-38 49
STY4563 NP_458649.1 putative membrane protein Not tested SPI-7 Protein 1e-27 41
t4261 NP_807859.1 hypothetical protein Not tested SPI-7 Protein 1e-27 41