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Name : PSPTO_0879 (PSPTO_0879) Accession : NP_790718.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0210 EC number : - Position : 950387 - 951844 bp Length : 1458 bp Strand : - Note : see PMID:20190049 for expression data; similar to GP:14042214, and GP:16505434; identified by sequence similarity; putative DNA sequence : ATGCAATGGACAGAAGAACAACTGCCAGCTATTCACTCCTTCGCAAAGAAGCTACTGGTCCAGGCGTTTGCCGGTACCGG GAAGACAACGACACTCGTCGGTTACGCCACGCATAACTCGTCGGTCAAAATGCTGTACCTCTGCTACAACAAAGCCGTTG AGATCGCGGCAAAGAACCGTTTTCCACGTAACGTGACCTGCAAAACAGCTCACGGCCTCGCCTACGCTGTCTATGGCAGC CAGTACAAACACAAGCAGGCTGGCAATCTGCGTTTGACCGACATCGCGAGGACGATCAATACCCAGGACTGGGAGCTGGC CAAAGATATCGTTTCGACCCTCAATGCCTTCATGGCCAGCAAGGATCTGGAGCTGCTGGAAGACCACTTTGTGCGATTCC AGAGCAACCGCACACTGACCTCGGTCCAGCAGCAGTACATGAGTAAAGCGCTCAACCTGACCAGAGACGTTTGGGACAAG ATGGTCGATATCCAGGACCGCTCAGTCTCCATGACGCACGACGGCTATCTGAAGCTGTACCAGATGAGCCAGCCGGATCT GAGCCAGCGCTTCGGTGCGATTTTGCTCGACGAAGGGCAGGACGTGAACCCGGTGATCGCGAACCTGGTCCAGATCCAAA AAATCACGCAAGTGACCGTAGGTGATCGGCATCAGCAACTTTATCGGTTCAGAGGCGCTGTGGATGCTTTAAACAGCCCG GCTATGAAGGACGCCGAGAAGCACTTCCTGACTCAGAGCTTCAGGTTTGGGCCGGCAGTTGCCTACGTGGCCAACGTCAT CCTGTCCTTCAAGGGTGAAAAGATCCCCCTGCAAGGCCTGGGACAGCCCACGTTGGTGAAACGAGCCTTACCGGAGGATC TACCTCACCGAACCTACCTGCACCGCACTGTGAGCGGTGTGATCGAGAACGCGCTGCGCCTGGTCAACCAAGACCACCGC ATGCAGTGGATCGGAGGGATCGACAGCTATTCCTTGCGTGATCTGGAGGACCTGTTCTATTTCAGCCGGCATATGAATGA CCAGGTTCAGCAGCGAAAACTGCTCACTGACTATGCCGATTACGACCAGTATGTCGTGATCGCGAAGGCCACGCAGGATC CTGAGATGCTGCGCTCGATCAAAATGATCGAAAACTACCCCGACCTGCCCAAACGAATTGAGCAACTGCGAGGAGCCTCT GTCACCTCGGAGCTCGATGCAACGGTGACCCTCAGCACTGCGCACAGAGCCAAAGGTCTGGAGTGGGACTTCGTTGGGCT TTATGACGACTTTTCTGCGGATCCGCTTTCCCCTGACATCGACGCCGGCAAACGCGACGATGAGCTGAACCTTCTATACG TCGCTGTCACAAGAGCCATGAAGATTCTGGCGGTCAACTCACTCGTGATCGATATCATGCAGCGCTTCAAGGACATGAAG CAGCGCTCAAGACCTTGA Protein sequence : MQWTEEQLPAIHSFAKKLLVQAFAGTGKTTTLVGYATHNSSVKMLYLCYNKAVEIAAKNRFPRNVTCKTAHGLAYAVYGS QYKHKQAGNLRLTDIARTINTQDWELAKDIVSTLNAFMASKDLELLEDHFVRFQSNRTLTSVQQQYMSKALNLTRDVWDK MVDIQDRSVSMTHDGYLKLYQMSQPDLSQRFGAILLDEGQDVNPVIANLVQIQKITQVTVGDRHQQLYRFRGAVDALNSP AMKDAEKHFLTQSFRFGPAVAYVANVILSFKGEKIPLQGLGQPTLVKRALPEDLPHRTYLHRTVSGVIENALRLVNQDHR MQWIGGIDSYSLRDLEDLFYFSRHMNDQVQQRKLLTDYADYDQYVVIAKATQDPEMLRSIKMIENYPDLPKRIEQLRGAS VTSELDATVTLSTAHRAKGLEWDFVGLYDDFSADPLSPDIDAGKRDDELNLLYVAVTRAMKILAVNSLVIDIMQRFKDMK QRSRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13373.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 9e-156 | 66 |
| RL034 | AAP84161.1 | putative DNA helicase | Not tested | PAPI-1 | Protein | 1e-157 | 66 |
| EXA45 | ABD94654.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 5e-159 | 66 |
| STY4664 | NP_458743.1 | putative DNA helicase | Not tested | SPI-7 | Protein | 2e-92 | 43 |
| t4355 | NP_807948.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-92 | 43 |
