Gene Information

Name : PSPTO_0863 (PSPTO_0863)
Accession : NP_790703.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 934867 - 935535 bp
Length : 669 bp
Strand : -
Note : similar to GP:18077180, and GP:16505343; identified by sequence similarity; putative

DNA sequence :
ATGAGCCGTTATTTAAAGCTGGCCGACTCGCAGCGGGCGCACATCACCAGCTTGAGGATGGCCATCGTCCTGCTGGCGCT
CCTGGCCCTGGGGCTGGGTATCGGCTGGTATCGAGCACCGCAGAACATGACCATTCACGTTCCGCCCGACCTGCGTTCCG
GCAGCACACGCCTTTGGTGGGACATCCCTCCTCAGTCGGTGTACGCCTTTGGCCTGTACATCTTTCAGCAAATGAACCGC
TGGCCGGTCGACGGTGAACAGGATTATCAGACGAACATCACGCGCCTGGACGCTTACATTACACCGGCTTGCAAGCAATA
CCTGCAGAGCGATTTTGATCTGCGCAAGTCCAGCGGTGAGCTGCGCAAGCGTGTCCGCGGTGTCTACGAGATTCCCGGCC
GAGGCTTTGGCGACTCGCCTGAACTGCGGACGGTGACCAACTCCATCGACGACTGGACGGTGACGCTCGACATCTCAGCC
GACGAGTATTACGGCGGTCAGCTGGTCAAGCGTGCCCTCGCACGATACCCGCTTCACGTTGTACGCATGGACGTCGACCC
TGAAACCAATCCCTTCGGCTTGGCATGGGACTGCTACAACGGCGCGCCACAACGCATCGAGGGCAACGTCGAAACTCCCG
CAGCTCCATCGAAAGGAGTCTTCAAATGA

Protein sequence :
MSRYLKLADSQRAHITSLRMAIVLLALLALGLGIGWYRAPQNMTIHVPPDLRSGSTRLWWDIPPQSVYAFGLYIFQQMNR
WPVDGEQDYQTNITRLDAYITPACKQYLQSDFDLRKSSGELRKRVRGVYEIPGRGFGDSPELRTVTNSIDDWTVTLDISA
DEYYGGQLVKRALARYPLHVVRMDVDPETNPFGLAWDCYNGAPQRIEGNVETPAAPSKGVFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph80 CAI36121.1 hypothetical protein Not tested PPHGI-1 Protein 5e-91 88
unnamed ABR13366.1 hypothetical protein Not tested PAGI-5 Protein 5e-57 65
EXA37 ABD94646.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-56 65
RL026 AAP84153.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-57 65
ORF SG61 AAN62283.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-61 59
ORF C51 AAN62145.1 hypothetical protein Not tested PAGI-2(C) Protein 6e-61 59
STY4568 NP_458653.1 possible exported protein Not tested SPI-7 Protein 2e-53 53
t4265 NP_807863.1 hypothetical protein Not tested SPI-7 Protein 2e-53 53
PMI2581 YP_002152300.1 hypothetical protein Not tested Not named Protein 2e-49 50
YpsIP31758_3709 YP_001402663.1 hypothetical protein Not tested YAPI Protein 3e-51 50
api35 CAF28509.1 putative exported protein Not tested YAPI Protein 2e-51 50
YE3486 YP_001007645.1 hypothetical protein Not tested YAPI Protein 7e-50 49
Pmu_03110 YP_005176210.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 7e-41 48