Gene Information

Name : PSPTO_0858 (PSPTO_0858)
Accession : NP_790698.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 928775 - 929074 bp
Length : 300 bp
Strand : -
Note : see PMID:20190049 for expression data; identified by Glimmer

DNA sequence :
ATGAGAGCCATGGATGCCCTGACTCAAAATCTGATCGACAGCCTGACTCAACTACTCAAAAACCCGCAGGAAGATGCTCT
ACTGGCCTTGAAAATCTGCGCACCGGTACTGATCGAGCACCTGGAAGTCGTGAAACATGTGGCGGTTGATCGTCGAGAGA
TCCAGTCCCAACTGCACAAAGCGCTGGACCAGTGGCTTGAGAATCACCCACAGCCTGAAAGCGCGCAGAAGGCTCTTCTC
ACGTTGCTGGATCAGGAGTTGCTGACCAAACAGTTCCTCGATAAAGAGGCCTCCGCATGA

Protein sequence :
MRAMDALTQNLIDSLTQLLKNPQEDALLALKICAPVLIEHLEVVKHVAVDRREIQSQLHKALDQWLENHPQPESAQKALL
TLLDQELLTKQFLDKEASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph85 CAI36126.1 hypothetical protein Not tested PPHGI-1 Protein 3e-31 92
unnamed ABR13361.1 hypothetical protein Not tested PAGI-5 Protein 2e-19 62
EXA32 ABD94641.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-19 62
RL021 AAP84148.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-19 61