Gene Information

Name : PSPTO_0849 (PSPTO_0849)
Accession : NP_790689.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 917806 - 918744 bp
Length : 939 bp
Strand : -
Note : similar to GP:16505351, and GP:16505351; identified by sequence similarity; putative

DNA sequence :
ATGAACCTGCGCAAGCCTTCGGCATGGACGGCCTTGGCCCTGTCGATCTCGACCGGGCCAGCCGCCGCCGGTACAGTGAC
CTCGGCCACCCTCGCCGCCTCAACCCTGTCGCCTGACTGCCTGGAGTACAAGGTGGTCGGCATATGCTACTGGCTGCTCT
GCACGCCGTTTGGCTGCAAGGTCAAGACGTCGACCAAGGTTCGACATTATGTTCCCGACGCGGTTGTATCGAGCTACTCG
AACACTGGGGAAAACCCTTGGGTCGAAGTCTCTTCGCTGAGTTCACCCACTTCATTCGCCCAGGATGGCGGCGACGGAAC
CACCAGCCACAACAACGAAGACAACCTGGCCAAATTCAAAAACACTGACGTCATTGGCCACCCCGGGGGAGCTACGTTCA
GTAAGTTTGCCAGCGCTTCGGGGTATGCCTGTCAGGGTGCTGCGACCCCCTACATGCCTTACCTGCTGAGCACGCTGGAC
ACCATCGCCTGGCGTTATGGTGTTCCAGAATCAGCCTATCCCGAAGCCCTGATTCCCGGTCAGCGAGAGGTGGGCGGTCT
CACCTCGGGGGACATGTGGGGAAGCCTTTATCCCCGTAGTGGTTTTATCCATCAAGCCGACGATTACAAGGCAGCGGCCG
TGATCGCGCAGCGCGCTGGTGACGTGGTCACTCGCCGCGGTCAGATTCACATCTATCAACCCCTTCTGGCAAAACCTCAG
TCAGGCTACTGGCCTGCTGGGGAATTGATCGAGACCGACGCCAGCACCGGTAAGTGGCAAGAGCTCACGCCGACCCTCAG
TCAAAGCTGTGCGGTATTCCCGAACTCGCAGCCCCGTGTGCAGGCGACCGATGGCGGTTATGCCTGGGCGCTATGGCGAC
CCTATTCCTGCTGCAAGCGGCAAGGACAAACTTTTCTTGGCAGTACGGACTTTCAATGA

Protein sequence :
MNLRKPSAWTALALSISTGPAAAGTVTSATLAASTLSPDCLEYKVVGICYWLLCTPFGCKVKTSTKVRHYVPDAVVSSYS
NTGENPWVEVSSLSSPTSFAQDGGDGTTSHNNEDNLAKFKNTDVIGHPGGATFSKFASASGYACQGAATPYMPYLLSTLD
TIAWRYGVPESAYPEALIPGQREVGGLTSGDMWGSLYPRSGFIHQADDYKAAAVIAQRAGDVVTRRGQIHIYQPLLAKPQ
SGYWPAGELIETDASTGKWQELTPTLSQSCAVFPNSQPRVQATDGGYAWALWRPYSCCKRQGQTFLGSTDFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 8e-128 93
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 3e-102 74
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-102 74
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-100 73
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-102 73
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-103 71
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 6e-66 52
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 3e-75 51
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 3e-75 51
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 7e-73 51
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 1e-73 51
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 4e-69 50
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 8e-64 49
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 1e-59 49