Gene Information

Name : PSPTO_0760 (PSPTO_0760)
Accession : NP_790607.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate transport system, ATP-binding protein FecE
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 808253 - 809044 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCATTCTGAAGGCGCAGCACCTCGACATCGGCTACGGCGCAACGCGGATCGTGCAGGACCTGTCATTCAGCCCGCC
CGCGGGGCAGGTCACGGCGTTGATCGGCCCCAACGGCTGCGGCAAATCCACGCTGCTCAAGGCGTTCGCGCGGATCCTCA
CCCCGCAGTCGGGCAGCCTGAGCCTGGACGGTAAAGGCTACAGCCAGCTGTCGGCCAGGGAGCTGGCCTGCAAGGTGGCG
TTTTTGCCGCAAGTGCTGCCGATTCCCGAAGGCGTCAACGTGCGCCAACTGGTGGCTTACGGCCGCAGCCCGCACAACAG
TTTGTGGGGGCGTTTGAGCGGGGCCGATCAGCACAGTGTCGATCAGGCGTTGCAGCGCATGGAACTGGCTACCCTGGCCG
AACGCCCGCTGTCCGATTTGTCCGGCGGGCAGCGGCAGCGCGCCTGGCTGGCGATGATTCTCGCGCAGGACGCAGCCATC
GTTTTGCTCGATGAACCGACCACCTACCTGGACATCAGCCATCAGGTCGAACTGCTGGACCTGATGCGCGAGCTTAGCGC
TGAAGGCAAAACCGTGATTACCGTGCTCCATGACATCAATCAGGCCTGCCGCTACGCCGACCATCTGGCGGTGATGCAGG
GCGGACGTCTGGTGACCTGCGGCGCGCCGGGTGATGTGCTGACCGCCGAGCTGGTGTGTCAGGTGTTCGACGTGCACGTG
CAGATCATGCGCGAGCCGGTGGCCGGCACGCCGATGTGCATTGTCGAACGCAGCACCCGCTGCACCAGTTGA

Protein sequence : 
MSILKAQHLDIGYGATRIVQDLSFSPPAGQVTALIGPNGCGKSTLLKAFARILTPQSGSLSLDGKGYSQLSARELACKVA
FLPQVLPIPEGVNVRQLVAYGRSPHNSLWGRLSGADQHSVDQALQRMELATLAERPLSDLSGGQRQRAWLAMILAQDAAI
VLLDEPTTYLDISHQVELLDLMRELSAEGKTVITVLHDINQACRYADHLAVMQGGRLVTCGAPGDVLTAELVCQVFDVHV
QIMREPVAGTPMCIVERSTRCTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-67 53
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-54 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-54 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-54 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-54 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-54 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-52 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-49 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-49 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_0760 NP_790607.1 iron(III) dicitrate transport system, ATP-binding protein FecE BAC0164 Protein 1e-67 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_0760 NP_790607.1 iron(III) dicitrate transport system, ATP-binding protein FecE VFG1042 Protein 1e-67 53
PSPTO_0760 NP_790607.1 iron(III) dicitrate transport system, ATP-binding protein FecE VFG0925 Protein 3e-58 46