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Name : ribD (PSPTO_0690) Accession : NP_790537.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 743981 - 745126 bp Length : 1146 bp Strand : + Note : see PMID:20190049 for expression data DNA sequence : ATGAGTGCAGTGTTGACTGAACAGGCAGCCCTCGACGTTCATTACATGGCCCATGCGCTGGAACTGGCGCGCAAGGGCCT TTATTCGACACACCCCAACCCGCGAGTCGGTTGCGTGATCGTGCGTGACGGCCAGATTGTCGGTCAGGGCTGGCATGCGC GGGCTGGCGAGCCGCACGCCGAAGTGCACGCGCTGCGCGAGGCCGGGGAGCTTGCCCGGGGCGCAACCGCCTACGTCACA CTTGAACCGTGCAGCCATCAGGGACGCACCCCGCCGTGCGCCGATGCACTGATCAGCGCCGGGCTGGCGCGGGTCGTTGC GGCAATGCAGGACCCCAATCCGCAAGTGGCCGGCAGCGGGCTTTTGCGCCTGATGACTGCCGGTATCAGCGTTCAGTGCG GCGTACTGGAAGGCGAGGCGCGAGCGCTGAACAAAGGTTTTATCAAGCGCATGGAAACCGGACGGCCCTATGTGCGGGTC AAGATGGCCATGAGCCTGGATGGCAGAACGGCCATGGCCAGCGGTGAAAGCCAGTGGATCACCGGCCCCGAGGCGCGTTC TGCGGTTCAGCGCCTGCGCGCCCAATCGAGCGTGGTGCTGACCGGTGCCGATACGGTGCTGGCCGACAAGGCACGCCTGA CCGTGCGCCCTGACGAGCTGGGGCTCAATGCCGAACTCACTGCGCTGGCGGCTGCGTGTCCGCCCCTGCGCGTATTGATC GACGGACGGCTGCGCGTGCCATTGGATACGCCGTTCTTTCAGGCGGGCAGTGCGCTGGTCGTGACCTGCGCCGCGGCGTC GGCGCGGGGTCGTTATCAGGAAGACGGTCACGAGATGCTGGCGCTGGCCGACAGCGCCGGTCATGTTGACCTGCGCAGGT TGATGGGCGAACTGGGCGCGCGGGGCGTCAACGAGGTGCTGGTCGAAGCCGGTCCGCGTCTGGCCGGTGCCTTCACGCGT CTCGGGCTGGTCGACGAATTTCAGCTATTCATTGCAGGCAAGTTTCTCGGTTCGTCGGCCCGGCCGCTGCTCGATCTGCC CCTGGCGCAGATGAGTGAAGCGCTGGAGCTGAACATCATTGAAATGCGAGCCGTCGGCAATGACTGGCGAGTCATTGCTC TCCCTGTCAGTGCACCCGGCGTATAA Protein sequence : MSAVLTEQAALDVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREAGELARGATAYVT LEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISVQCGVLEGEARALNKGFIKRMETGRPYVRV KMAMSLDGRTAMASGESQWITGPEARSAVQRLRAQSSVVLTGADTVLADKARLTVRPDELGLNAELTALAAACPPLRVLI DGRLRVPLDTPFFQAGSALVVTCAAASARGRYQEDGHEMLALADSAGHVDLRRLMGELGARGVNEVLVEAGPRLAGAFTR LGLVDEFQLFIAGKFLGSSARPLLDLPLAQMSEALELNIIEMRAVGNDWRVIALPVSAPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-64 | 47 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-64 | 47 |
