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Name : PSPTO_0057 (PSPTO_0057) Accession : NP_789917.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : transposition helper protein Function : - COG functional category : R : General function prediction only COG ID : COG1100 EC number : - Position : 78120 - 79010 bp Length : 891 bp Strand : - Note : This gene assignment is based in part on its location adjacent to a gene for transposase.; see PMID:20190049 for expression data; similar to GP:710585, GB:L26976, GB:L27490, GB:L27490, GB:L27488, GB:L27489, GB:S69200, GB:S69326, GB:U13216, GB:U13214, GB:X DNA sequence : ATGAGCACATACGACCACATCCATCCTGATTTTCGACCAGTGTTGCAGTTGAGCGACCGGGAACGGATCCTCTTCATAGG AGAGGAACGTTGGATAGGTTATGCATTGGCTCGCACAATCCTCGACACGCTCAATGATCTGATCGTCATGCCCAAGCGAG CCCGCATGCCTAATTTGCTGATCGTGGGGGATTCCAATAACGGTAAGACGACCGTTATCAGGCGATTTCAGAAAACGCAT GGCGAAGGGTACGTCGACGAAAATGATGATCCGGTCCGCCCCCTGATTTTGGCAGAGGCCCCATCGACTGCTGACGAGAA GGCGCTGTATGTGGCTCTTTTGGAACAGCTATGGATGCCTTACAGGATCACGGATACCAAGTTGGCGTTGCGCTACCAGG TTATTCACTCCTTCCGCGAGCTTAAGGTCAGAATGCTGATCATTGATGAGTTCCATTCATTGCTCACAGGCTCTGCAATC AAGCAGCGTGAGGTGATGAACGCTTTGAAGTCCCTCTGCAACGAGCTGGTGATTCCAATCATTGGTGTTGGAACCACGGA TGCTGTTCGCATCCTCCATCATGATCCACAACATGCCAGTCGCTTCGATGTTATCAAGCTCGATCAATGGAAGCTCGATC CCGAATTTCAGCGCATGCTCAAAGGCTTTGAGTCGATACTGCCTTTGAAAAAGCCTTCTGGGCTGGCACATCCAGACAAG GCTCGGCGTGTACACGCGATTTCCGGCGGTAACCTTGGGAATGTACACCGGCTTCTGATGGAGTGCTCGAAGCAGGCCAT AGTCTCCGGCAAGGAATGCATTGACATAGAACTCATCGAGAGCATGTCATGGTTGCGTCCTACTCGTGGCATCCGGGAGC AGTCTCTGTAA Protein sequence : MSTYDHIHPDFRPVLQLSDRERILFIGEERWIGYALARTILDTLNDLIVMPKRARMPNLLIVGDSNNGKTTVIRRFQKTH GEGYVDENDDPVRPLILAEAPSTADEKALYVALLEQLWMPYRITDTKLALRYQVIHSFRELKVRMLIIDEFHSLLTGSAI KQREVMNALKSLCNELVIPIIGVGTTDAVRILHHDPQHASRFDVIKLDQWKLDPEFQRMLKGFESILPLKKPSGLAHPDK ARRVHAISGGNLGNVHRLLMECSKQAIVSGKECIDIELIESMSWLRPTRGIREQSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tniB | ADZ05761.1 | transposition helper protein | Not tested | AbaR11 | Protein | 5e-60 | 45 |
| tniB | AFH57218.1 | putative transposase | Not tested | AbaR4c | Protein | 5e-60 | 45 |
| tniB | AFV47962.1 | transposition protein TniB | Not tested | AbaR25 | Protein | 5e-60 | 45 |
| BJAB07104_00250 | YP_008207715.1 | putative ATPase, putative transposase | Not tested | AbaR25 | Protein | 7e-60 | 45 |
| tniB | AFV47990.1 | transposition protein TniB | Not tested | delta-AbaR25 | Protein | 5e-60 | 45 |
| BJAB0868_00257 | YP_008211583.1 | putative ATPase, putative transposase | Not tested | AbaR26 | Protein | 7e-60 | 45 |
| ABZJ_00232 | YP_005524188.1 | putative transposition helper protein | Not tested | AbaR22 | Protein | 7e-60 | 45 |
| tniB | AEO37450.1 | TniB transposition protein | Not tested | AbaR4 | Protein | 7e-60 | 45 |
| tniB | AFC76427.1 | TniB | Not tested | AbaR5 | Protein | 7e-60 | 45 |
| 1_17 | CAJ77012.1 | Transposition Helper | Not tested | AbaR1 | Protein | 5e-60 | 45 |
| ABZJ_00251 | YP_005524207.1 | putative transposition helper protein | Not tested | AbaR22 | Protein | 3e-59 | 45 |
