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Name : PSPTO_5586 (PSPTO_5586) Accession : NP_795306.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 6365506 - 6366504 bp Length : 999 bp Strand : + Note : similar to SP:P39858, GB:J04970, SP:P14384, and PID:179932; identified by sequence similarity; putative DNA sequence : ATGACGGTGCTCGTGACAGGCGCCGCCGGATTCATTGGCTTCCACGTTGCCAAACATCTGTGTGAGCAGGGTATTGAAGT TGTCGGCATCGATAACCTGAACGATTACTACAGCGTCGAACTGAAACATTCACGACTGGCCATCCTTGAGCGCATGCCAG GTTTCGTCTTCAAAAGGCTGGACATTACGGATGCAACGGGTCTGTCCACTCTGTTCGAACACAATACCTTCGAACAGGTC ATTCACCTCGCCGCCCAGGCGGGTGTGCGCTATTCGATGGAGCAACCCGACGCCTACATCCAATCCAATCTGGTCGGTTT CAGCAACGTGCTCGAGGCCTGCCGCCAGCACCGCCCCTCGCACCTGATTTATGCCTCCAGCAGTTCGGTCTACGGGGCCA ATACGCGCCTGCCGTTTCGGGTGGAGGATGCCGTCGACAGGCCGCTCTCCCTCTATGCGGCCACAAAGCGCGCCAATGAG CTGGCGGCTTACAGCTACTGCCACCTGTACGGCTTGCGAGCTACCGGGCTGCGCTTTTTCACGGTTTACGGCCCCTGGGG TCGACCGGACATGGCGCTGTTCAAGTTCACCCAAGCCATGCTCCGCGAAGAGCCTGTGGACATTTACAACCATGGTGAGA TGGCGCGGGATTTCACCTACATCGACGACATCGTGGAAAGCATCCTACGCCTGCGTCTGCGCCCGCCCGAGCCAGCGGGC GGTGAGCCTGCACATCAGCTCTTCAACATCGGACGCGGCCAGCCCGTCAAGCTGCTGGAGTTCGTCGATTGCCTGGAAAA GGCGCTGGGCCTCAAGGCCCAGCGTCGCTATCTCCCTCTGCAGGCAGGCGATGTACTGCAGACCTGGGCTGACGTTACCG CCTTGGCCCGTTGGATCGATTTCCAGCCGCACGTCTCGGTCGACAGCGGTGTGAGCGCGTTCGTTGAGTGGTACCGAGAG CATTATCAATCCGGACCGCCTCCGCTATCTCTCCAATAA Protein sequence : MTVLVTGAAGFIGFHVAKHLCEQGIEVVGIDNLNDYYSVELKHSRLAILERMPGFVFKRLDITDATGLSTLFEHNTFEQV IHLAAQAGVRYSMEQPDAYIQSNLVGFSNVLEACRQHRPSHLIYASSSSVYGANTRLPFRVEDAVDRPLSLYAATKRANE LAAYSYCHLYGLRATGLRFFTVYGPWGRPDMALFKFTQAMLREEPVDIYNHGEMARDFTYIDDIVESILRLRLRPPEPAG GEPAHQLFNIGRGQPVKLLEFVDCLEKALGLKAQRRYLPLQAGDVLQTWADVTALARWIDFQPHVSVDSGVSAFVEWYRE HYQSGPPPLSLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-87 | 53 |
