Gene Information

Name : gph-1 (PSPTO_0567)
Accession : NP_790414.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : phosphoglycolate phosphatase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0546
EC number : -
Position : 622769 - 623569 bp
Length : 801 bp
Strand : +
Note : see PMID:20190049 for expression data

DNA sequence :
TTGTTTGCAGGCAAGCTGCCCAAGCTGATCATGTTCGATCTGGACGGCACGCTGGTGGACTCGGTCCCCGATCTTGCCGT
CGCCGTGGACACCATGCTGGCTGAGCTTGGCCGGCCGACAGCCGGGCTGGAATCGGTCCGCGCCTGGGTCGGTAACGGCG
CGCCGGTGCTGGTGCGTCGTGCGCTGGCCAACAACCTTGACCACAGCGGTGTCGATGAAGCGCTTGCCGAGCGGGGGCTG
GACATTTTCATGCGCGCCTACGCTGAAAAGCACGAGTTCACCGTGGTTTACCCTGGCGTGCGCGAAACCCTCAAGTGGCT
GCAGAAGATGGGCGTCGAAATGGCCCTCATCACCAACAAGCCGGAACGCTTCGTTGCGCCGCTGCTCGATGAAATGAAGC
TGGGGCGGTTCTTTCGCTGGATCATCGGTGGCGACACCATGCCGCAGAAAAAGCCTGACCCAGCGGCGCTGTTTTTCGTG
ATGAAAATGGCCGGTGTCCCGGCCTCGCAGTCGCTGTTTGTCGGCGACTCGCGCAGTGACGTGCAGGCCGCCAAGGCTGC
CGGTGTGGCCTGCGTTGCGCTGAGTTATGGCTACAACCACGGCAGGCCGATTGCCGAGGAAAATCCGGCGATGGTAATAG
ATGATCTGCGCAGGCTGATTCCCGGTTGCCTGGATCTGGACGCTGAGATACTGTTGCCCGACATCAAACGTCCCTCCTCA
AGAGAATCCATCGTGGTGGTCACTCGCAAACTCTGGATGAAAGTCATCAAGGCCCTGGCCCGCTGGCGTTGGCGCGCCTG
A

Protein sequence :
MFAGKLPKLIMFDLDGTLVDSVPDLAVAVDTMLAELGRPTAGLESVRAWVGNGAPVLVRRALANNLDHSGVDEALAERGL
DIFMRAYAEKHEFTVVYPGVRETLKWLQKMGVEMALITNKPERFVAPLLDEMKLGRFFRWIIGGDTMPQKKPDPAALFFV
MKMAGVPASQSLFVGDSRSDVQAAKAAGVACVALSYGYNHGRPIAEENPAMVIDDLRRLIPGCLDLDAEILLPDIKRPSS
RESIVVVTRKLWMKVIKALARWRWRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00337 YP_008207802.1 putative phosphatase Not tested AbaR25 Protein 4e-30 42
BJAB0868_00341 YP_008211667.1 putative phosphatase Not tested AbaR26 Protein 4e-30 42