Gene Information

Name : PSPTO_5526 (PSPTO_5526)
Accession : NP_795250.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein/P47K family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 6291936 - 6293147 bp
Length : 1212 bp
Strand : -
Note : see PMID:20190049 for expression data

DNA sequence :
ATGGCAAACCTTCTACCTGTTACCGTCCTTTCCGGTTTTCTCGGTGCCGGAAAAAGCATCTTACTCAATTACATACTGCG
CAATCGTGAAAACTTGCGAGTTGCGGTGATCGTCAATGATATGAGCGAGATCAACATTGATGGCGGCGAAGTTCAGCGCG
ATGTCAGCCTGAACCGCGCCGAAGAAAAGCTGATCGAGATGAGCAATGGCTGCATTTGCTGCACCCTGCGCGAGGATTTG
CTCGAAGAAGTCAGCCGCCTTGCCCAAGACGGTCGTTTTGATTACTTATTGATCGAATCCACGGGTATTTCCGAGCCGTT
GCCGGTCGCCGAGACCTTCACCTTTCGTGACGAGGCAGGCAAGAGCCTGATGGACCTGGCGCGGCTGGACACGATGGTCA
CTGTGGTCGACGGGGTGAATTTCCTGCTTGATTACGAAGCGGCAGACGGCTTGTCCACACGCGGCGAAAGCCTCGGCGAA
GATGATGACCGCTCGATCACTGACCTGTTGATCGAACAGATCGAGTTCGCCGACGTCATCCTGCTCAGCAAGATTGACCT
GATCAGCTCCAGCGAGCGCGAAGAGCTGATGGCCATTCTGAAACGCCTGAACCCTGATGCGCAGATCGTGCCGATGGTCA
TGGGTCAGGTGCCGCTGGCGACAATTCTCAACACCGGTCGTTTTGACTTCGAGCGTGCGTCCCAGGCCCCTGGCTGGCTG
AAGGAAATGCGCGGTGAACATGCGCCGGAAACCGAGGAATACGGCATCGCCTCGACGGCTTATCGTGCTCGTCGCCCCTT
TCATCCGCAGCGCTTCTTCGATCTCATCAATCGCCCCTGGACCAACGGCAAACTGCTGCGCTCCAAGGGTTTCTTCTGGC
TGGCCAGCAAGTACAAGGACGCGGGCAGCTGGTCGCAGGCGGGCGGCTTGATGCGTCACGGTTTTGCCGGACGCTGGTGG
CGCTTCGTGACCCGCGACAGCTGGCCTCAGGACAAGGAAAGCGTCGCATCGATTCTGGAAAACTGGTCGAGCGAAACCGG
CGACTGCCGTCAGGAGCTGGTCTTCATCGGGCAGAACATCGATTTCACGCTGCTCACGGCCGAACTGGACAACTGCCTGC
TCACCGACGACGAGATGGCTGCAGGTGCCGAGCGCTGGCGCCAGCTGTCCGATCCCTTTGGCGAATGGTATGAAGACGAG
GTGGCTGCCTGA

Protein sequence :
MANLLPVTVLSGFLGAGKSILLNYILRNRENLRVAVIVNDMSEINIDGGEVQRDVSLNRAEEKLIEMSNGCICCTLREDL
LEEVSRLAQDGRFDYLLIESTGISEPLPVAETFTFRDEAGKSLMDLARLDTMVTVVDGVNFLLDYEAADGLSTRGESLGE
DDDRSITDLLIEQIEFADVILLSKIDLISSSEREELMAILKRLNPDAQIVPMVMGQVPLATILNTGRFDFERASQAPGWL
KEMRGEHAPETEEYGIASTAYRARRPFHPQRFFDLINRPWTNGKLLRSKGFFWLASKYKDAGSWSQAGGLMRHGFAGRWW
RFVTRDSWPQDKESVASILENWSSETGDCRQELVFIGQNIDFTLLTAELDNCLLTDDEMAAGAERWRQLSDPFGEWYEDE
VAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 2e-75 48
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 7e-76 48