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Name : PSPTO_0562 (PSPTO_0562) Accession : NP_790409.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : polyamine ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 617525 - 618649 bp Length : 1125 bp Strand : + Note : - DNA sequence : ATGAGCGACGTCGATACAAGCGCTGGAGCGAGTGATGTTCTGGTCAGCTTTCGTGGTGTGCAGAAGAGCTACGACGGCGA AGCACTGATCGTCAAAGACCTCAATCTGGACATTCGCAAAGGCGAATTCCTCACCCTGCTCGGGCCTTCCGGCTCCGGCA AGACCACCAGCCTGATGATGCTGGCCGGCTTCGAAACACCGACCGCTGGCGAAATTCTGCTCGGTGGCCGCGCCATCAAC AACGTGCCGCCGCACAAGCGTGACATCGGCATGGTGTTCCAGAACTACGCTTTGTTTCCGCACATGACGGTTGCCGAGAA CCTCGCGTTCCCGCTGTCGGTGCGTGGCATGAGCAAGACCGACGTCGGCGAAAAAGTCAAAAAGGCTCTGGGCATGGTCC AGCTCGACACGTTTGCGCATCGCTACCCGGCGCAGCTGTCCGGTGGCCAGCAGCAACGTGTAGCTCTGGCGCGCGCGTTG GTGTTCGAGCCACAACTGGTGCTGATGGATGAGCCGCTCGGCGCGCTCGACAAACAACTGCGCGAACACATGCAGATGGA GATCAAGCATCTGCACCAGCGCCTCGGTGTGACAGTGGTCTACGTGACCCACGACCAGGGTGAAGCACTGACCATGTCCG ACCGGGTTGCGGTCTTCCATCAAGGTGAGATCCAGCAGATCGCGCCGCCACGCAGCCTGTACGAAGAGCCGAAAAACACC TTCGTAGCCAATTTCATCGGCGAGAACAATCGACTCAACGGGCGTCTGGTCAGCCAGGACGGCGACCGCTGCGTGGTCGA GCTGGAGCGCGGCGAGAAAGTGCACGCACTGGCGATCAACGTCGGTCGGCCGGGTGGCCCGGTGACGCTGTCCATTCGCC CCGAACGCATCAACCTCAATGGCCGCAGCGAAAGCTGTGTGAACCGTTTCTCTGGTCGAGTGGCCGAGTTTATCTACCTC GGCGACCACGTCCGTGTGCGTCTGGAAGTTGCCGGCAAGACTGACTTCTTCGTCAAGCAGCCGATTGCCGAGCTGGACCC GACGCTGAGTGTGGGTGACGTTGTGCCGATCGGTTGGCAAGTCGAGCACGTGCGTGCGCTCGATCCCCTGCAGCAAGAGC ATTGA Protein sequence : MSDVDTSAGASDVLVSFRGVQKSYDGEALIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLGGRAIN NVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVGEKVKKALGMVQLDTFAHRYPAQLSGGQQQRVALARAL VFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRSLYEEPKNT FVANFIGENNRLNGRLVSQDGDRCVVELERGEKVHALAINVGRPGGPVTLSIRPERINLNGRSESCVNRFSGRVAEFIYL GDHVRVRLEVAGKTDFFVKQPIAELDPTLSVGDVVPIGWQVEHVRALDPLQQEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 5e-37 | 41 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPTO_0562 | NP_790409.1 | polyamine ABC transporter ATP-binding protein | VFG1206 | Protein | 9e-41 | 42 |
