|
Name : PSPTO_5411 (PSPTO_5411) Accession : NP_795138.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : ISPsy5, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 6145421 - 6146974 bp Length : 1554 bp Strand : - Note : - DNA sequence : ATGCGACCATTGCCCGACAACCTTCCTGACGATCCCGTATTGCTCAAACAGATGCTGCTTGAGAGCTACGAAGCACGCTC GCGCGAACAGGAAGTTAAAGACGCCTACGCCACTCACATCGTTGATCTCAAAGAGCAGATCAAGCTGCTGCGTGACCGTA TTTTTGGTCGAAAGTCCGAACAAACCGTCGAGCCTAATACCCCTCAACTTGCCTTGTTCAATGAACCTGAAAGCGAGCCT ATGCTCCCGGTCGGCGATGCTGATGAGGAAGTAGTTGCTCCTGCGCCACGCCGTGGCAAGCGCAAGCCACTGTCGGCTGA TCTGCCGCGCATTGAAGTCATCCACGAGCTGCCCGAACACGAACTGACCTGTGCCTGCGGTTGCCGCAAGCATGTCGTCA GCGAGGAAACCAGCGAGCAACTGGATATCGTGCCGATGCAGATTCGGGTGATCAAACACATCCGCAAAGTCTACGGCTGT CGTGGCTGTGAGTCGGCACCGGTCACAGCCGGCAAGCCTGCGCAGTTGATTGAAAAGAGCATGGCCAGCCCCAGCGTGTT GGCCATGCTGCTGACCACCAAGTATGTCGACGGCTTGCCGCTGCATCGTTTTGAAACGGTGCTAAGCCGACATGGCATAG AAATCCCGCGTCAAACGTTGGCCCGCTGGATTATCCAGTGCGGCGAACATTTGCAGCCGCTGTTAAATCTGATGCGTGAT CGATTGCTGGAAAGCCCGGTCATCCACTGTGACGAAACCCGCGTTCAGGTACTGAAAGAACCAGATCGAGACCCGACCAG CCAATCCTGGATGTGGGTACAGGCCAGCGGGCCTCCAGATCATAAAGTCGTATTGTTCGACTACACTTCCAGCCGCGCGC AGGACGTACCGTTACGGCTGCTGGAAAGTTATCGCGGCTATGTGATGACTGATGATTACGCGGGCTATAACGCGCTGGCG TTACAACCGGGCGTGGAGCGCTTGGCGTGTATGGCCCATGCGCGGCGCAAATTTGTCGAAGCACAAAAAGTGCAACCTAA GGGCAAGACCGGGCGTGCCGATATCGCGCTGACGATGATCAATAAGCTGTACGGTATCGAGCGCGAATTGAAAGACGGCA GCGACGAACAGCGCTTTACCGGTCGGCAGGAGAAAAGCCTGCCAATCTTGGCTCAGTTGAAAAGCTGGCTGGATAAAACT CAGTCCCACGTGACGCCGCAAAGCGTGCTGGGCAAGGCAGTTGGTTATCTGGCGAATAACTGGAGTCGGCTGAAGCGTTA CGTGGAAGCCGGCTTTTTACCGATCGACAACAACCCGGCAGAGCGCGCAATAAAGCCGTTTGTTATTGGGCGCAAAGCCT GGCTGTTCAGCGACACGCCTAAAGGCGCCACCGCCAGTGCACAGATCTATAGCTTGGTCGAGACCGCCAAGGTCAACGGC CAGGAGCCCTATACGTGGCTGCGCCACGTACTGGAGAGGTTGCCACTTGCGCAGTCGGTGGCCGACTATGAGGCGTTGCT GCCGTGGAACTGCTCACCGGAAATGCCAAGATAA Protein sequence : MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLKEQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEP MLPVGDADEEVVAPAPRRGKRKPLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQTLARWIIQCGEHLQPLLNLMRD RLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQASGPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALA LQPGVERLACMAHARRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQLKSWLDKT QSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVETAKVNG QEPYTWLRHVLERLPLAQSVADYEALLPWNCSPEMPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71494.1 | unknown | Not tested | Hrp PAI | Protein | 0.0 | 90 |
