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Name : cadA-1 (PSPTO_5279) Accession : NP_795010.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Resistance Product : cadmium-translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 6003536 - 6005794 bp Length : 2259 bp Strand : - Note : see PMID:20190049 for expression data DNA sequence : ATGGGCACGACAATCAAGAATCCCTCCGCACATGACCACGATCATGACCATGATCACGGGGCGCACGAACACGAGCATAA ATCCCCAGAGCCTGCGCATTCGTGCTGCTCCAGTGATGCGCAACCTGCCGTGGTGACGTTTGCCGACGCGCCGACATCCG GTAGCCGCTTGAGCAACTTCCGTATCGAAGCGATGGATTGCCCGACCGAGCAGACCCTGATCCAGAACAAGCTCGGCAAG CTGGCCGGTGTGCAGAAGCTCGAGTTCAACCTGATCAACCGCCTGCTGGGCGTCTGGCATGACCTGCCGTCCACCGATCC GATTCGCGAGGCCATCAGCTCGCTGGGCATGCAGGCCGAGCCGGTCGAGGAGGGTGTTGTGCCTGCTGCATCGGTTCCTG CGCCGGCGAAACACTGGTGGCCATTGGCATTGTCCGGCGTCACAGCGCTGGGTGCCGAAGTGGTCCATCTGGCTTCACTC GGCCCGACTTGGGTCGTTGCGCTGCTGGCGTTGGTGTCGATCTTCAGTTGTGGGTTGACCACCTATAAAAAGGGCTGGAT CGCGCTTAAGAACTTCAACCTGAACATCAATGCCCTGATGAGCATTGCGGTGACCGGCGCGATTCTGATCGGTCAGTGGC CTGAAGCGGCGATGGTGATGTTTCTGTTTACCGTGGCCGAGTTGATCGAAGCCAAATCCCTGGACCGCGCCCGCAACGCG ATCAGCGGCCTGATGCAACTGACGCCGGAACTGGCGACCGTGAAGCAGGCTGATGGCAGCTGGCAGGAAATTGAAGCCAA AAATGTCGAACTGGGCGCTATCGTCAGGATAAAGCCGGGTGAGCGGGTCGGGCTGGATGGTGAAGTGGTGTCCGGTAACT CGACCATTGATCAGGCCTCTATCACGGGTGAAAGCCTGCCGGTCGAGAAAACCATTGGCGATAAAGTTTTCGCGGGCACT ATCAACCAGGCAGGGTCGCTGGAGTATCGCGTCACCGCTGCGGCGAACAATTCGACGCTGGCGCGCATCATTCATGCGGT GGAAGCGGCCCAGGGTTCACGCGCGCCGACTCAGCGTTTCGTCGACAGCTTCTCGCGCATCTATACGCCAGTAGTGTTCG TTGTCGCGTTGGGCGTGGCGCTGATTGCGCCGCTGTTTTTTGGCGGGCAATGGTTTGACTGGATCTACCGGGCGCTGGTG TTGCTGGTCGTCGCGTGCCCGTGTGCGCTGGTGATTTCTACGCCGGTGACCATTGTCAGCGGCCTGGCAGCAGCGGCGCG CAAAGGCATTCTGATCAAGGGCGGCGTTTATCTGGAGATGGGCGAGAAGCTTGATTACCTGGCCCTCGACAAGACCGGCA CCCTGACCCACGGCAAGCCGGTGCAGACCGATTACGTGCCGCTGGACCCCACAGTCGCCGAAAGCGCGCCGGCGATTGCC GCGAGCCTTGCCGGGCGCTCCGATCACCCTGTTTCTCAGGCGATTGCCAAAGCCGCTGATAACAGCCTGACGTTGTACGA GGTCACAGCGTTTGAGGCCTTGGGCGGGCGTGGCGTGAAGGGCGAAGTGAACGGCCAGATGTACCATTTGGGCAACCACC GCTTGGTCGAAGAGCTGGGCCTGTGCTCGCCAGCGCTGGAAGCCAGGCTTGATGCGCTGGAAATGCAGGGCAAGACTGTA GTGCTGTTGCTGGATGCGTCCGGTCCGATCGCGCTGTTTGCGGTAGCCGACACCGTGAAGGAAACCAGCCGTGAAGCCAT TGCTCAGTTGCATGAACTGGGCATCAAGACCGTCATGCTGACGGGTGATAACCCGCACACCGCCAAGGCAATTGCCGATC AGGTCGGGATCGATGAAGCGCAGGGCAACCTGCTGCCTGCCGACAAACTGAGTGCCATCGAAGCGCTTTACGCGCGCAAC CATCGCGTGGGCATGGTGGGTGACGGCATCAACGATGCCCCGGCACTGGCTCGGGCCGAGATTGGCTTTGCGATGGCGGC TGCGGGGACTGACACGGCGATCGAAACGGCAGATGTCGCCCTGATGGACGATGATCTGCGCAAAATCCCGACGTTCATTC GACTGTCCCGTCAGACCTCGGCGGTGCTCAAGCAAAACATTATCCTGGCCATCGCGACCAAAGTGCTGTTCATCGGCATC ACCTTCGCGGGCCTGGCGACCATGTGGATGGCCGTATTTGCCGACATGGGCGTGAGCCTGCTGGTGGTGTTCAACGGCTT GCGATTGCTCAAGAAGTGA Protein sequence : MGTTIKNPSAHDHDHDHDHGAHEHEHKSPEPAHSCCSSDAQPAVVTFADAPTSGSRLSNFRIEAMDCPTEQTLIQNKLGK LAGVQKLEFNLINRLLGVWHDLPSTDPIREAISSLGMQAEPVEEGVVPAASVPAPAKHWWPLALSGVTALGAEVVHLASL GPTWVVALLALVSIFSCGLTTYKKGWIALKNFNLNINALMSIAVTGAILIGQWPEAAMVMFLFTVAELIEAKSLDRARNA ISGLMQLTPELATVKQADGSWQEIEAKNVELGAIVRIKPGERVGLDGEVVSGNSTIDQASITGESLPVEKTIGDKVFAGT INQAGSLEYRVTAAANNSTLARIIHAVEAAQGSRAPTQRFVDSFSRIYTPVVFVVALGVALIAPLFFGGQWFDWIYRALV LLVVACPCALVISTPVTIVSGLAAAARKGILIKGGVYLEMGEKLDYLALDKTGTLTHGKPVQTDYVPLDPTVAESAPAIA ASLAGRSDHPVSQAIAKAADNSLTLYEVTAFEALGGRGVKGEVNGQMYHLGNHRLVEELGLCSPALEARLDALEMQGKTV VLLLDASGPIALFAVADTVKETSREAIAQLHELGIKTVMLTGDNPHTAKAIADQVGIDEAQGNLLPADKLSAIEALYARN HRVGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPTFIRLSRQTSAVLKQNIILAIATKVLFIGI TFAGLATMWMAVFADMGVSLLVVFNGLRLLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 68 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 4e-117 | 46 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 7e-117 | 42 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 6e-117 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadA-1 | NP_795010.1 | cadmium-translocating P-type ATPase | BAC0298 | Protein | 0.0 | 68 |
