|
Name : PSPTO_5216 (PSPTO_5216) Accession : NP_794947.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : lipoprotein, NLPA family Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 5938115 - 5938897 bp Length : 783 bp Strand : - Note : - DNA sequence : ATGAAAAAGACGTTTTTGATCACCGCTCTGGCGGCTGCGCTTTCGATTGGCCTGGCTCACGCAGGCGAAAAACTGGTCGT CGGCGCAACGCCCGTACCGCACGCGGAAATCCTTGAGCTGATCAAGCCGACCCTGGCCAAAGAAGGCGTGGACCTGGAAA TCAAGGTCTTCACTGACTACGTACAGCCCAACGTTCAACTGAACGAAAAGCGTCTGGACGCCAACTACTTCCAGACCAAG CCTTACCTGGACGGCTTCAACAAAGGCAAGGGCGCCAATCTGGTGACCGGCGTTGGCGTACACGTCGAACCGTTCGGTGG CTACTCCAACAAGTACAAGAAACTGGCTGACCTGCCTGAAGGCGCAACCATCGCCATCCCGAACGAAGGCAGCAACGCCG GTCGTGCCCTGCTCCTGTTGCAGAAAGGTGGCCTGATCACCCTGAAGGACCCGACCAACGCCCTGGCCACGCCTAAAGAC ATCGCGACCAACCCGAAAAAACTCAAGTTCCGCGAACTGGAATCGGCTGTATTGCCGCGCGCCTTGAGCCAGGTTGACCT TGCCTTGATCAACACCAACTACGCGCTGGAAGCCAAGCTCAATCCGAAGAAGGATGCGCTGATCATTGAGGGCGCTGATT CGCCGTACGTGAACTTCCTCGTCACCCGCGAAGATAACGCCCACACCGACGCCATCGAAAAACTGTCGAAAGCGCTGACC AGCCAGCAAGTCAAAGACTTCATCAACAAGAAGTACGACGGCGCGGTACTGCCTGCGTTCTGA Protein sequence : MKKTFLITALAAALSIGLAHAGEKLVVGATPVPHAEILELIKPTLAKEGVDLEIKVFTDYVQPNVQLNEKRLDANYFQTK PYLDGFNKGKGANLVTGVGVHVEPFGGYSNKYKKLADLPEGATIAIPNEGSNAGRALLLLQKGGLITLKDPTNALATPKD IATNPKKLKFRELESAVLPRALSQVDLALINTNYALEAKLNPKKDALIIEGADSPYVNFLVTREDNAHTDAIEKLSKALT SQQVKDFINKKYDGAVLPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 2e-37 | 43 |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 3e-27 | 42 |
