Gene Information

Name : PSPTO_5197 (PSPTO_5197)
Accession : NP_794928.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 5915834 - 5916694 bp
Length : 861 bp
Strand : -
Note : see PMID:20190049 for expression data

DNA sequence :
ATGAATGCTGTCGCGCAAGGCCACACGGCCAGCACGAGCGCCCAACCGCAAGAAGCCTTGTTGCAGGTTCGCGGCGTCAG
CCTCGAATACCGCACGCCAGAGCGCGTGGTACGTGCGACGCACCAGGTCAGTTTCGAGGTCGATCCGTCTGATCGTTTCG
TTCTGCTCGGCCCGTCCGGCTGCGGCAAGTCCACGCTGCTCAAAGCGGTAGCGGGGTTCATTCAGCCCAGCGAAGGCGAG
ATTCGTCTGGCGGGCAATCAGGTCACCGAGCCCGGTCCTGATCGCATCGTGGTGTTTCAGGAGTTCGACCAGCTGCCACC
GTGGAAAACCGTGATCGAGAACGTCATGTTTCCGCTCTTGGCGTCACGCACCCTGAAGCGCCCCGAAGCACTGGAGCGTG
CACGTTATTACCTGGAAAAAGTCGGGCTCAGCGCGTTTGCCGATGCTTATCCGCACACCTTGTCCGGCGGCATGAAAGCC
CGCGTGGCCATTGCCCGCGCCTTGGCCATGCAGCCGAAAATCCTGCTGATGGACGAACCGTTCGCCGCGCTGGATGCACT
GACCCGTCGCAAGATGCAGGAAGAGCTGCTGGAGCTGTGGGACGAAGTGCGTTTCACGCTGCTGTTTGTTACGCACTCCA
TCGAAGAAGCGCTGGTGGTGGGCAATCGCATCCTGCTGCTGTCGCCGCATCCGGGGCGGGTGCGGGCGGAAATCAACAGC
CACCAATACGACCTGAAAAGCCTCGGCGGCGTCGGCTTCCAGCAAACCGCCCAGCGTATTCATCGTCTGTTGTTTGATGA
AGGTGAGACCGGGACCGTCGAGCAGGAACTGAATTTTCAGGACATCCGGATTGCTTATTGA

Protein sequence :
MNAVAQGHTASTSAQPQEALLQVRGVSLEYRTPERVVRATHQVSFEVDPSDRFVLLGPSGCGKSTLLKAVAGFIQPSEGE
IRLAGNQVTEPGPDRIVVFQEFDQLPPWKTVIENVMFPLLASRTLKRPEALERARYYLEKVGLSAFADAYPHTLSGGMKA
RVAIARALAMQPKILLMDEPFAALDALTRRKMQEELLELWDEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVRAEINS
HQYDLKSLGGVGFQQTAQRIHRLLFDEGETGTVEQELNFQDIRIAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-39 42