|
Name : PSPTO_5023 (PSPTO_5023) Accession : NP_794756.3 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : sodium/hydrogen exchanger family protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3263 EC number : - Position : 5717662 - 5719458 bp Length : 1797 bp Strand : + Note : see PMID:20190049 for expression data DNA sequence : ATGGTCAGCTTTCGCGCTTTTCGCTTCACTTTCGTTTTCTATGGAGTACCGCCCTTGGACGCCACCACCATCAACAGCCT GTTCCTGATCGGCGCGTTGCTGGTAGCCGCAAGCATCCTGGTCAGTTCTCTCTCATCGCGCCTCGGCATCCCTATCCTGG TCATCATTCTGGCCGTGGGCATGGTGGCGGGCGTGGATGGCGGCGGGATCATCTTCGATAACTACGCTACCGCCTACCTG GTCGGCAATCTCGCGTTGGCCGTCATCCTGCTCGACGGCGGCCTGCGAACGCGGGTGGCCAGTTTTCGGGTAGCGCTGTG GCCGGCCTTGTCGCTGGCAACGGTGGGCGTGTTGATTACCACCGTATTGACCGGCATGGTCGCCGCGTGGCTGTTCAACC TGAGCGTTATTCAGGGCTTGCTGATCGGCGCCATTGTCGGTTCCACAGACGCCGCAGCGGTGTTCTCGCTGCTCGGCGGC AAAGGCCTGAACGAGCGTGTCACCGCAAGCCTTGAGATCGAGTCGGGGAGCAACGATCCCATGGCGGTGTTCTTGACCGT GACCCTGATCGGCATGCTCGCCAGCGGCCAGACCGGTCTGCATTGGGGGCTGCTGGGGCACCTGATTCAGGAGTTTGGCA TCGGCAGCTTCATCGGCCTGGGTGGCGGCTGGATCCTGCTGCAACTGGTCAACCGTATCAATCTGGCCGCCGGGCTGTAC CCGATTCTGGTCATCGCGGGGGGGCTGGCGATCTTTGCCCTGACCAACGCCATTCATGGCAGCGGTTTTCTTGCGGTGTA CCTGTGCGGCCTGGTGCTCGGCAACCGGCCGATCCGCAGCCGCCACGGCATTCTGCACATGCTCGACGGCATGGCCTGGC TGGCGCAGATCGGCATGTTTCTGGTGTTGGGCCTGCTGGTCACACCGCACGACCTGCTGCCGATTGCGATACCGGCGCTG GGCCTGGCGCTGTGGATGATTCTGGTCGCACGCCCGTTGTCGGTGATGGTCGGTCTGCTGCCGTTCAAGGCGTTTCATGG TCGCGAAAAGGCGTTCATTGCCTGGGTCGGCCTGCGTGGGGCGGTCCCGATCATTCTGGCAGTGTTCCCGCTGATGGCCG GGCTGCCCAACGCGCAACTGTATTTCAACCTCGCCTTCTTCATCGTGCTGGTTTCGCTGCTGCTGCAAGGCACCAGCCTG CCGTGGATGGCCAAGCTGCTGAAAGTGACGGTTCCGCCAGACCCCGCGCCTATTTCCCGGGCTGCGCTGGAGGTGCACGT CACCAGCGAATGGGAGCTGTTCGTCTACCGGCTGGGCGCTGAAAAATGGTGCATCGGTGCGGCGCTGCGCGAATTGAAGA TGCCGGAAGGCACACGGATTGCCGCACTGTTCCGCGGCCAGCAGTTGCTTCACCCGTCCGGCAGTACGACCCTGGAAGTG GGTGACCTGCTGTGTGTGATCGGCCATGAACACGATCTTCCTGCGCTGGGCAAACTGTTCAGCCAGGCACCGCAACGCGG TCTGGACCTGCGCTTTTTCGGCGATTTCGTGCTCGAAGGCGATGCGCGACTGGGCGAAGTGGCGGCGCTGTACGGCCTGA AACTCGACGGCATCGACCCCGGCATGCCGCTCAGCCAGTTCATTGTGCAAAAGAATCGCGGCGAGCCTGTGGTGGGTGAC CAGATTGAATGGAACGGCACTATTTGGACCGTTGCCGTGATGGACGGGAACAAGATCCAGAAAGTCGGCGTCAAATTCCC CGAAGGAACCCGCCCGGGCCCCGGACTGTTCCTTTAA Protein sequence : MVSFRAFRFTFVFYGVPPLDATTINSLFLIGALLVAASILVSSLSSRLGIPILVIILAVGMVAGVDGGGIIFDNYATAYL VGNLALAVILLDGGLRTRVASFRVALWPALSLATVGVLITTVLTGMVAAWLFNLSVIQGLLIGAIVGSTDAAAVFSLLGG KGLNERVTASLEIESGSNDPMAVFLTVTLIGMLASGQTGLHWGLLGHLIQEFGIGSFIGLGGGWILLQLVNRINLAAGLY PILVIAGGLAIFALTNAIHGSGFLAVYLCGLVLGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIAIPAL GLALWMILVARPLSVMVGLLPFKAFHGREKAFIAWVGLRGAVPIILAVFPLMAGLPNAQLYFNLAFFIVLVSLLLQGTSL PWMAKLLKVTVPPDPAPISRAALEVHVTSEWELFVYRLGAEKWCIGAALRELKMPEGTRIAALFRGQQLLHPSGSTTLEV GDLLCVIGHEHDLPALGKLFSQAPQRGLDLRFFGDFVLEGDARLGEVAALYGLKLDGIDPGMPLSQFIVQKNRGEPVVGD QIEWNGTIWTVAVMDGNKIQKVGVKFPEGTRPGPGLFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAB61290.1 | unknown | Not tested | PAI I CFT073 | Protein | 9e-144 | 66 |
| f536 | AAC61706.1 | F536 | Not tested | PAI I CFT073 | Protein | 9e-144 | 66 |
