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Name : ureC (PSPTO_4895) Accession : NP_794629.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : - Position : 5543886 - 5545586 bp Length : 1701 bp Strand : + Note : see PMID:20190049 for expression data DNA sequence : ATGAAGATTTCCAGACAAGCCTACGCCGACATGTTCGGCCCCACCGTTGGCGACAAGGTTCGCCTGGCGGATACCGAGCT GTGGATCGAGGTCGAGAAAGACTTCACCACCTACGGCGAAGAAGTGAAGTTCGGCGGTGGCAAGGTCATCCGTGACGGCA TGGGCCAGGGTCAACTGCTGGCCGCCGACGTGGTTGATACGCTGATCACCAACGCCTTGATCATCGACCACTGGGGCATC GTCAAGGCTGACGTCGGCATCAAGAACGGCCGTATCGCAGCCATCGGCAAGGCCGGTAACCCGGACATTCAGCCGGACGT GACCATTGCCGTGGGCGCAGCCACCGAAGTCATTGCCGGCGAAGGCATGATCCTTACCGCCGGCGGCGTCGATACGCACA TCCACTTCATCTGCCCGCAGCAGATCGAAGAAGCGCTGATGAGCGGCGTGACCACCATGATCGGCGGCGGCACCGGCCCT GCCACCGGCACCAACGCGACCACCGTAACGCCCGGCCCGTGGCACATGGCGCGCATGCTCCAGGCCTCGGACTCGTTCCC GATGAACATCGGTTTCACCGGCAAGGGCAACGTCAGCCTGCCCGGCCCGCTGATCGAACAGGTCAAGGCCGGTGCCATCG GCCTGAAACTGCACGAAGACTGGGGCACCACCCCGGCCGCCATCGACAACTGCCTGAGCGTGGCGGACGAATATGACGTG CAGGTCGCAATCCACACCGACACGCTCAACGAGTCAGGTTTTGTCGAAACCACCCTGGCAGCGTTCAAGAACCGCACAAT CCACACCTACCATACCGAAGGTGCCGGTGGCGGCCATGCGCCGGACATCATCAAGGCGTGCGGCTCACCCAACGTGCTGC CAAGCTCGACCAACCCGACCAGGCCGTTCACCCGCAACACCATCGACGAGCACCTGGACATGCTCATGGTCTGCCACCAC CTGGACCCGAGCATCGCCGAAGACGTGGCCTTCGCGGAAAGCCGCATTCGCCGCGAAACCATTGCCGCCGAGGACATCCT CCACGACCTGGGCGCGTTTTCCATGCTCAGCTCCGACAGCCAGGCCATGGGGCGGGTTGGCGAGGTGATCATGCGCACCT GGCAAACCGCCGACAAGATGAAGAAACAGCGTGGCCCGCTGCCGCAGGATGGCCCAGGCAACGATAACTTCCGCGCCAAG CGCTACATAGCCAAATACACCATCAACCCGGCGATCACCCACGGCATCAGCCATGAAGTGGGCTCCATTGAAGTCGGCAA ATGGGCGGACCTGGTGCTCTGGCGCCCGGCGTTCTTCGGCGTCAAACCGACCCTGATCCTCAAGGGCGGTGCCATCGCCG CCAGCCTGATGGGCGACGCCAACGCTTCCATCCCGACGCCGCAACCGGTCCACTACCGCCCCATGTTCGCAAGCTTCGGC AGCTCGCTGCACGCCACCAGCCTGACCTTCATCAGCCAGGCCGCATTCGACGCGGGCGTGCCGGAAACACTGGGCTTGAA GAAGCAGATCGGCGTGGTCAAAGGCTGCCGCACCGTGCAGAAAAAAGACCTGATCCACAACGATTACCTGCCGGACATCG AAGTCGACCCACAGACCTATCAGGTCAAGGCCGACGGTGTGTTGCTGTGGTGCGAACCTGCGGACGTGCTACCAATGGCG CAGCGGTATTTTCTGTTTTAG Protein sequence : MKISRQAYADMFGPTVGDKVRLADTELWIEVEKDFTTYGEEVKFGGGKVIRDGMGQGQLLAADVVDTLITNALIIDHWGI VKADVGIKNGRIAAIGKAGNPDIQPDVTIAVGAATEVIAGEGMILTAGGVDTHIHFICPQQIEEALMSGVTTMIGGGTGP ATGTNATTVTPGPWHMARMLQASDSFPMNIGFTGKGNVSLPGPLIEQVKAGAIGLKLHEDWGTTPAAIDNCLSVADEYDV QVAIHTDTLNESGFVETTLAAFKNRTIHTYHTEGAGGGHAPDIIKACGSPNVLPSSTNPTRPFTRNTIDEHLDMLMVCHH LDPSIAEDVAFAESRIRRETIAAEDILHDLGAFSMLSSDSQAMGRVGEVIMRTWQTADKMKKQRGPLPQDGPGNDNFRAK RYIAKYTINPAITHGISHEVGSIEVGKWADLVLWRPAFFGVKPTLILKGGAIAASLMGDANASIPTPQPVHYRPMFASFG SSLHATSLTFISQAAFDAGVPETLGLKKQIGVVKGCRTVQKKDLIHNDYLPDIEVDPQTYQVKADGVLLWCEPADVLPMA QRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 0.0 | 76 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 0.0 | 76 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-162 | 63 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-162 | 63 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 1e-162 | 63 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-162 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | NP_794629.1 | urease subunit alpha | VFG0270 | Protein | 4e-158 | 65 |
