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Name : hopAO1 (PSPTO_4722) Accession : NP_794465.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : type III effector HopAO1 Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2453 EC number : - Position : 5347118 - 5348524 bp Length : 1407 bp Strand : - Note : previously known as HopPtoD2 (PMID 12032338; Petnicki-Ocwieja et al, 2002); see PMID:20190049 for expression data; similar to GP:14994330; identified by sequence similarity; putative DNA sequence : ATGAATCCCCTGCAACCTATTCAGCACAGCATTACAAATTCCCAAATGAGTGGTGGTCAGCAATTAGAGGCGGAGGGCTC TCAGGCCCACAATTCCTATTCCCATCCTGACAGGATTTCGCTTTCCCAATTGAGCCAAAGCGCTCACCTAGCTCTAGATC ACCTTTCAACTCAGCCTAATACCGATCACCAACGCGTTGCATCACTGGTACGCAACGCTGTGCAGGACGGTAAGTTCCAA CTTCAATCCAGTAACGACACGCAAGTAACCTATAAAACTTCAGTCTGTCCGCCAGCTAACGCCGACACCATGGGGGCCGC CCACTTAATTAATAACGAGCTGACGGTTCAGGCCCGATTAAATGATCAACTTGAGTACGACATCGTCAGCGCTCATTTGT ATGGCCCTTCGGAAGCCATATCCATCGATGCATCCAGTCCTCCCTCGGCCAACGATCTAGCGTCCTCTGGCTTGAGCGAA CGTACGCATCTAGGTATGAATCGTGTCCTCTTACGCTACGCGGTGCCCCCTCGGGAAACCGAAGACCAATGTGTTATGGT GATCGACAAAATGCCCCCCCCCAAACACGGCAAAATGTCTTTCTTCCGTACCACTAATGACTTGAGCAAACTGCCTTTGG GAATGGAGACGGGCGGGTTGTCCGACCTGAAATTGGCTGGTTGTGAACGTATTTCTTCCGTCGAGCAGGTGAAGAGTATC CGCGCAGCGCTTGGAGGCGGGCCGCTCACCGTACTAGATCTGCGCGAAGAATCTCATGCGATTGTCAACGGTTTGCCTAT CACCTTACGTGGCCCGATGGATTGGGCCAACGCCGGCCTATCCCAGGTTGACGGAGCGGCACGTGAAAGTGCCATGATTA CAGAACTGAAGCGCACTAAGTCTTTAACGTTGGTCGATGCCAATTATGTAAAAGGTAAAAAAAGTAATCCTCAAACGACA GAACTGAAAAATTTGAATGTCCGGAGCGAGCGAGAAGTCGTTACAGAGGCCGGCGCGACCTATCGCCGCGTGGCCATTAC CGACCATAACAGGCCTAGTCCGGAAGCGACCGACGAGCTAGTAGACATCATGCGCCACTGCCTGCAGGCAAATGAGTCGC TAGTTGTGCACTGTAACGGCGGTCGGGGCCGTACTACCACGGCTATGATAATGGTCGACATGCTTAAGAACGCTCGTAAC CATTCCGCAGAAACCCTCATCACGCGTATGGCCAAGCTAAGCTATGACTACAACATGACGGATCTAGGCAGCATTTCTGC ACTCAAGCGGCCATTCCTAGAGGACAGACTAAAATTTCTGCAGGCCTTTCACGACTATGCCCGCAACAACCCAAGCGGAT TATCTCTTAATTGGACACAGTGGCGCGCAAAAATAGCGTTAGAATGA Protein sequence : MNPLQPIQHSITNSQMSGGQQLEAEGSQAHNSYSHPDRISLSQLSQSAHLALDHLSTQPNTDHQRVASLVRNAVQDGKFQ LQSSNDTQVTYKTSVCPPANADTMGAAHLINNELTVQARLNDQLEYDIVSAHLYGPSEAISIDASSPPSANDLASSGLSE RTHLGMNRVLLRYAVPPRETEDQCVMVIDKMPPPKHGKMSFFRTTNDLSKLPLGMETGGLSDLKLAGCERISSVEQVKSI RAALGGGPLTVLDLREESHAIVNGLPITLRGPMDWANAGLSQVDGAARESAMITELKRTKSLTLVDANYVKGKKSNPQTT ELKNLNVRSEREVVTEAGATYRRVAITDHNRPSPEATDELVDIMRHCLQANESLVVHCNGGRGRTTTAMIMVDMLKNARN HSAETLITRMAKLSYDYNMTDLGSISALKRPFLEDRLKFLQAFHDYARNNPSGLSLNWTQWRAKIALE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| avrPphD2 | AAO33450.1 | AvrPphD2 | Not tested | Not named | Protein | 0.0 | 100 |
