Gene Information

Name : shcV (PSPTO_4721)
Accession : NP_794464.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : type III chaperone ShcV
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5346338 - 5346730 bp
Length : 393 bp
Strand : -
Note : see PMID:20190049 for expression data; identified by Glimmer

DNA sequence :
ATGAGCTTATCGCCGACGCTGCAAAAGCTAACTAATATATTGGGCCCGACAAAAAATGCCAAGCCTGTCACAGAGGCTAT
CCAGTGGCAGGAAGGCATGGATATAACGCTGCATGTCAGCGGCGACAGCCTTACCTTACTAGCTAAAATCATAGAACTGC
GTACAGACCCTAAAGACGACATTTTATTGCGCAAGCTGCTTACCCATACGTTTCCGGGCCTGCGTCTGCGCCGTGGCGCG
CTTACCATCAACCCTGATGAAAGTGCCCTGGTTTTCTCTTATGAACACGATTTTCACCTTCTGGACAAAGCCCGTTTTGA
GAGCCTGCTGGCCAACTTTGCTGAAACGGCGCAGGAGCTTCGAGACACAGCGACACATTTTCGTTTTAACTGA

Protein sequence :
MSLSPTLQKLTNILGPTKNAKPVTEAIQWQEGMDITLHVSGDSLTLLAKIIELRTDPKDDILLRKLLTHTFPGLRLRRGA
LTINPDESALVFSYEHDFHLLDKARFESLLANFAETAQELRDTATHFRFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO33451.1 unknown Not tested Not named Protein 5e-56 100