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Name : hopV1 (PSPTO_4720) Accession : NP_794463.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : type III effector HopV1 Function : - COG functional category : - COG ID : - EC number : - Position : 5345081 - 5346253 bp Length : 1173 bp Strand : - Note : see PMID:20190049 for expression data; identified by Glimmer DNA sequence : ATGCGGTTTGATGCTGCCCGAGGCCAGAAGCCCAAAGCCCCTATGGATGCACCGTCATCATTACGTTTGCGAGCGATAGC AGGTGGCATGCCCAGTGAAGAAGCAGGAACGACTGCACCTGCTGACGTGAATCAGCCTCCACCTGCTGATGTTCGTCCAG AAATGGGTGTAGGTCCTGTGAGACTCTTCGTTAAACTGATGGTAGGAACTCTGGCGCTGTCGACAGGAGTCCGTTTTGCA AGATACCCAGGTGATTTCGCGAAGGATCCGGGAGGCAGTGTATGGGCAGCAATCAATCTGCAGCATCGCTCGAGCGTCAC ACATCTTGAACAAGGCAATAAGACGGTTCTTGAGCGTTTCGGTGCACATATTCCAAAAGACAGTGCGTGTTTCAAAGCTC GCGCTGACGTCACACACGATGTTCCCTCAGGCGTGGCAGGGCAGTGGAACCACAAAACCCAACGGGTAAAACTGAACCCT AACATTCATTTCGAGAGCCATCCGGCACAGGTCGCCGGACATGAGTTCATACACTGTTACACGCATCCTGAGTTTGTCGA ACGCCATATAAAACATCCGCACTGGAAAGCCCTGAACGAAGGGTTGACGACTCGTTTGACAGAGAAACTGCCAGACCCTA AGCGTCTCTTGCCCATTCCCTTGGCAAAGGATCCCTATCATGGTTTCAAGCTGTCCACCGGGGACTCCTGGCCGGATGCG GCCAGGCGAATCGAAGACGAAGTTGGCGAAGATGTGTTGTTGAAAGCGTTCTTTGGCGGCGATGACCAGGCTATTAGTGA AGTAGCTAAAGCCGCTGCTCAGATCTACCCCAAGATTGCCTCACGTATTACCGAGAGGGAGTTGTATCAAGCGGGCAGCA TGCGTGGAGGACAACAGCTGGCCGAGTGTTACGTAGGTGCTTTGCTCAAAAACGGTCAGAAACTGCCTGACAGTTTTACG AATTATCTGCTACCTGTATTTAGCTATTCAGATATAAGCCCTGGTCACGCGAAAAAAATACAGGCGCAAGCGGAAAAAAG TCAAAAGCGGATGGGAATTGTGTTCGATACAGCGTTTTTTTCACCTGACCTGAAGACCCAGAGACTGGCACTTGGCATGC TACGGGAGGACCTGCTGATGCACTGGAAAAAAGTTATTCCGGATAGAAAGTAA Protein sequence : MRFDAARGQKPKAPMDAPSSLRLRAIAGGMPSEEAGTTAPADVNQPPPADVRPEMGVGPVRLFVKLMVGTLALSTGVRFA RYPGDFAKDPGGSVWAAINLQHRSSVTHLEQGNKTVLERFGAHIPKDSACFKARADVTHDVPSGVAGQWNHKTQRVKLNP NIHFESHPAQVAGHEFIHCYTHPEFVERHIKHPHWKALNEGLTTRLTEKLPDPKRLLPIPLAKDPYHGFKLSTGDSWPDA ARRIEDEVGEDVLLKAFFGGDDQAISEVAKAAAQIYPKIASRITERELYQAGSMRGGQQLAECYVGALLKNGQKLPDSFT NYLLPVFSYSDISPGHAKKIQAQAEKSQKRMGIVFDTAFFSPDLKTQRLALGMLREDLLMHWKKVIPDRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO33452.1 | unknown | Not tested | Not named | Protein | 0.0 | 100 |
