Gene Information

Name : PSPTO_4695 (PSPTO_4695)
Accession : NP_794443.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : ISPsy13, transposase OrfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5310495 - 5310746 bp
Length : 252 bp
Strand : +
Note : -

DNA sequence :
GTGCTCGATCAAGGCTATAGCCATATCGAAGCCGCCCGCTCGCTCGGGGTGGTGGAATCTGCGCTGCGTCGCTGGGTGAG
CCAGCTCCAGCAGGAGCGCAATGGCGTAACGCCCCAGAGCAAAGCCCTGACGCCCGAGCAGCAGAAAATTCAAGAGCAGG
AAGCCCGGATCGCTCGCCTTGAGCGGGAGAAATCCATTTTAAAAATGGCCAACGCGCTCTTGATGTCGGAAGAGCACGAG
CGCATGCGCTGA

Protein sequence :
MLDQGYSHIEAARSLGVVESALRRWVSQLQQERNGVTPQSKALTPEQQKIQEQEARIARLEREKSILKMANALLMSEEHE
RMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 5e-27 79
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 8e-14 51
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 1e-11 46
l7045 CAD33744.1 - Not tested PAI I 536 Protein 2e-12 45
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 2e-12 45
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 1e-12 44
api80 CAF28554.1 putative transposase Not tested YAPI Protein 2e-09 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_4695 NP_794443.1 ISPsy13, transposase OrfA VFG1553 Protein 3e-14 51
PSPTO_4695 NP_794443.1 ISPsy13, transposase OrfA VFG1485 Protein 1e-12 45