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Name : smpB (PSPTO_4515) Accession : NP_794268.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 5085014 - 5085496 bp Length : 483 bp Strand : + Note : see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01668 DNA sequence : ATGGCTAAGCTCAAGAAACACCCTACAGGGACCATCGCGCAGAACAAAAAGGCGCGCCACGATTACTTCATCGAACACAA GTTCGAGGCCGGTCTGGTCCTGTCTGGCTGGGAAGTAAAAAGCCTGCGTGCCACCAAGGTACAGCTGGTTGACAGTTACG TGCTGCTCAAGGACGGCGAGGCCTGGTTGATGGGTTGCCACATCACGCCTCTCAAGACTGCCAGCACGCACGTCATCGCT GACCCGACACGCACCCGTAAACTGCTCCTGAACCAGCGCGAGCTCGAAAAGCTCACCAGCTCGGTTCAGCAAAAAGGCTA CGCCTGTGTCGCCCTTTCCATTTACTGGAAGCAGCACTTGATCAAGTGCGAAATTGCTTTGGGTAAAGGGAAAAAGGAAT ACGACAAGCGCCACACCGAGCGCGAACGCGATTCGGACCGTGAGCTGCAGCGTGCCGTGCGCACCAAGGGCAAGGACGAC TAG Protein sequence : MAKLKKHPTGTIAQNKKARHDYFIEHKFEAGLVLSGWEVKSLRATKVQLVDSYVLLKDGEAWLMGCHITPLKTASTHVIA DPTRTRKLLLNQRELEKLTSSVQQKGYACVALSIYWKQHLIKCEIALGKGKKEYDKRHTERERDSDRELQRAVRTKGKDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-33 | 51 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 6e-25 | 43 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-24 | 42 |
