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Name : PSPTO_4448 (PSPTO_4448) Accession : NP_794202.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : sugar isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 5013691 - 5014665 bp Length : 975 bp Strand : + Note : see PMID:20190049 for expression data; similar to GP:9950693; identified by sequence similarity; putative DNA sequence : ATGAACCAATCCAGTGACCTGATCCAATCGGCGCAACGCACCATTCGTCTCGAGATCGAAGCCATACAAGGCTTGCTCGA ACGTCTTGACGGGGATTTCGTGCGCGCGTGCGAAATGATCCTCGCCAGCAAAGGTCGGGTTGTGGTGGTCGGCATGGGCA AGTCCGGGCACGTGGGCAAAAAAATCGCCGCAACACTGGCGAGCACCGGCACCACGTCTTTTTTTGTCCACCCGGCCGAA GCCAGCCACGGTGACATGGGCATGATTACCCGTGACGACATCATCCTGGCCCTGTCCAACTCCGGCAGCACCCACGAAAT TGTCACGCTGCTGCCGCTGATCAAGCGTCTGGGCATCAAGATGATCAGCCTGACCGGCGACCCCGAGTCAATTTTGGCCA GGGCCGCGGACATCAACCTCAATGCCCATGTCGTGCACGAAGCCTGCCCGCTCAATCTGGCACCGACGTCGTCAACCACC GCTGCATTGGTCATGGGCGATGCCCTGGCCGTGGCGCTGCTCGATGCACGGGGCTTCACTGCCGAAGATTTTGCATTTTC CCATCCGGGCGGTGCGCTAGGCCGGCGCCTGCTGCTCAAGGTCGAGAACGTCATGCACTCCGGTGACGCCCTGCCCAGCG TTCAGCGCGGCACCCTGCTACGGGACGCGCTGCTGGAAATGACCCGTAAGGGCCTGGGCATGACTGCAATTCTTGAAGCC GACGGCACGCTCGCCGGCATATTCACCGACGGCGACTTGCGCAGAACACTGGATCGCCCGGTCGATATCCGCCAGACCAC CATTGATGAAGTCATGACCCTCCACGGCAAGACGGCGCACGCAGACATGCTTGCCGCCCAGGCGCTGAAAATCATGGAGG ACAACAAGATCAGCGCTCTGGTCGTCGTGGACCAGAACGACAAGCCGGTGGGCGCATTCAACCTGCAAGACCTTTTGCGC GCAGGTGTCATGTGA Protein sequence : MNQSSDLIQSAQRTIRLEIEAIQGLLERLDGDFVRACEMILASKGRVVVVGMGKSGHVGKKIAATLASTGTTSFFVHPAE ASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGIKMISLTGDPESILARAADINLNAHVVHEACPLNLAPTSSTT AALVMGDALAVALLDARGFTAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAILEA DGTLAGIFTDGDLRRTLDRPVDIRQTTIDEVMTLHGKTAHADMLAAQALKIMEDNKISALVVVDQNDKPVGAFNLQDLLR AGVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 6e-57 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-57 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 8e-57 | 44 |
