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Name : murD (PSPTO_4410) Accession : NP_794164.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : - Position : 4977421 - 4978767 bp Length : 1347 bp Strand : - Note : see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02875 DNA sequence : GTGTCCCTGATCGTTTCCGACCGCTTCCGCATTGTTGTGGGGCTTGGCAAGAGTGGCATGTCCCTGGTTCGCTTCCTGGC GAACCGGGGCGTGTCCTTTGCTGTGGCCGACACGCGGGAAAATCCTCCTGAGCTGGCGACTTTGCGTCGTGACTATCCTC AGGTGGAAGTGCGGTGTGGCGAACTGGACGTGGACTTCCTCTGCCGTGCCGACGAGCTTTATGTCAGCCCTGGTCTGGCC CTGGCCACACCGGCCTTGCAGCAGGCGCATGCACGCGGCGCCAAGCTGTCCGGCGACATCGAACTGTTTGCCCGTTACGC CAAGGCACCGGTGATTGCGATTACCGGTTCCAACGCGAAAAGCACCGTGACCACGCTGGTCGGCGAGATGGCCGCAGCTG CCGGCAAGCGTGTTGCTGTGGGCGGCAACCTGGGCACCCCGGCGCTGGACCTGCTCAGCGATGATGTCGAGTTGTACGTG ATGGAATTGTCCAGTTTTCAGCTCGAAACCACTGATCAGCTCAATGCCGAAGTGGCGACCGTGCTGAACATCAGCGAAGA CCATATGGACCGTTATTCCGGTCTGCCGGCCTATCACCTCGCCAAGCACCGTATTTTCCGTGGCGCGCGGCAAGTAGTGG TCAATCGGCAGGACGCGCTGTCCCGTCCGTTGATCGGCGAAGGCCTGCCTTGCTGGACGTTCGGCCTCAACAAGCCTGAC TTCCACGGCTTTGGTCTGCGTGAAGAGAACGGCGAAAAATTCCTGGCATTCCAGTTCGAGAACCTGATGCCGGTGAGCGA GCTGAAAGTTCGCGGCGCACACAATCAGGCTAACGCACTGGCAGCCCTGGCGCTGGGGCATGCCGTGGGCCTGCCGTTCG ACGCCATGCTTTCCAGCCTGCGTGAGTTCACCGGCCTTGAGCACCGCTGCCAATGGCTGCGTGAGCGCAATGGCGTGGAC TACTACAACGATTCCAAGGCCACCAACGTGGGTGCTGCACTGGCCGCTATCGAAGGCCTGGGCTCGGATATCGGCGGCAA GCTGGTGTTGATCGCCGGTGGCGATGGCAAAGGTGCCGACTTCAGCGGCCTGCGTGCCCCCGTGGCTAAATACTGCCGCG CTGCGGTGTTGCTGGGTCGCGATGCCGAGCTGATTGCCCAGGCGCTGGGTGATGCCGTGCCGCTGATTCGTGTCGACACG GTTCAGGCGGCTGCCGAGCGCAGCGCCGAGCTGGCTCAGCGCGGCGATGCCGTGTTGCTTTCCCCTGCATGCGCCAGTCT GGACATGTTCAAGAATTATGAAGAGCGCGGACGTGTGTTCGCGCAGGCAGTGGAGTGCTTGTCATGA Protein sequence : MSLIVSDRFRIVVGLGKSGMSLVRFLANRGVSFAVADTRENPPELATLRRDYPQVEVRCGELDVDFLCRADELYVSPGLA LATPALQQAHARGAKLSGDIELFARYAKAPVIAITGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYV MELSSFQLETTDQLNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLIGEGLPCWTFGLNKPD FHGFGLREENGEKFLAFQFENLMPVSELKVRGAHNQANALAALALGHAVGLPFDAMLSSLREFTGLEHRCQWLRERNGVD YYNDSKATNVGAALAAIEGLGSDIGGKLVLIAGGDGKGADFSGLRAPVAKYCRAAVLLGRDAELIAQALGDAVPLIRVDT VQAAAERSAELAQRGDAVLLSPACASLDMFKNYEERGRVFAQAVECLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 3e-90 | 53 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 3e-90 | 53 |
