|
Name : PSPTO_0450 (PSPTO_0450) Accession : NP_790299.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : ISPsy8, transposase OrfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 493574 - 494353 bp Length : 780 bp Strand : + Note : similar to GP:17428451; identified by sequence similarity; putative DNA sequence : TTGGCGCGCAGTACGTTCTACTATCAGGTTCAGGTGCAATCCAGACCCGATCCAGATGCTGCTCTAAAGCAGGAGGTAGA GCGGATTTATCACGAGGAGAGAGGTCTTTATGGGGCTCGGCGCATCACAGCGGTTATCCGCAACTCAGGCACGCTGGTCA ACAAGAAGGTTGTGGAGAGATTGATGGCTGAACTGGGTCTGCGCTCCGTTGTTCGACCAAAAAAATACCGTTCCTATAAG GGCACCGTCGGAAAAATTGCACCGAATTTGCTGGAGCGCAATTTCACGGCGCAACGCCCGAACCAGAAATGGGTGACCGA TGTGACCGAGTTTAAAGTGGCCAATCGAAAGCTGTATCTCTCGCCTGTGATGGACCTGTACAACGGTGAGATCGTGGCGT ACGAATTGTCTACCAGGCCGTGCTTTGAGCTGGTCACCAGTATGCTGGACAAGGCGTTGCAGCAGTTGCAAGACGAGCCG AAGCTTGTGATGCACTCGGATCAAGGCTGGCAGTATCAACACGCGCAGTACCGTCAGAAACTGGCGGCAAAGGGTGTGAA GCAAAGCATGTCTCGTAAGGGAAATTGCCTGGACAACGCTGCGATGGAAAGCTTTTTTGGTACGCTTAAGTCCGAGTTTT TCTACTTGAAACGATTTGAAAGCATAGAAGAGCTGACGGCAGGTCTGGAGGAGTACATCCGCTACTACAACCATGACCGC ATTAAGCTGAAGCTAGGCGGCCTGAGCCCCGTAAAATACAGGACTCAGGCGGCAAGCTAA Protein sequence : MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITAVIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYK GTVGKIAPNLLERNFTAQRPNQKWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP KLVMHSDQGWQYQHAQYRQKLAAKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKRFESIEELTAGLEEYIRYYNHDR IKLKLGGLSPVKYRTQAAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 1e-70 | 55 |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 1e-72 | 55 |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 2e-57 | 52 |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 2e-57 | 51 |
| CDBH8_0905 | YP_005159997.1 | transposase-like protein | Not tested | Not named | Protein | 2e-53 | 49 |
| CDCE8392_1982 | YP_005134513.1 | transposase-like protein | Not tested | Not named | Protein | 2e-54 | 49 |
| SE0101 | NP_763656.1 | transposase | Not tested | SCCpbp4 | Protein | 9e-25 | 41 |
