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Name : PSPTO_4344 (PSPTO_4344) Accession : NP_794099.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : insecticidal toxin protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 4906645 - 4909305 bp Length : 2661 bp Strand : + Note : similar to GP:15981596, and GP:16416915; identified by sequence similarity; putative DNA sequence : ATGGTTAATAGCGCGGTACATTCCCACACGCCGGAACTGCTCGTTTCCGAGGTTCGTGGGCTGGTCGTGCGCCAGGTCCT CTTACATCGAACCGAAGCCGCGGAAGCCGCCGCAATGCGGGTTACCCGGCAGCGTTTCGACCTGGCAGGCAGAATGATCG CCGCCACTGATCCACGTCTGGCCAGCGCCAACCGGAGCACTGTCTACAGCCTTGGCGGCAACACGTTGGCCACCGAGAGT GTCGATGCCGGCTGGCGAGTTGCGCTGTTCGGCGAGGCTGGCCAGGTCTTGAATGGCTGGGACGCTCGCGGTAACGAGCG GCAGTTAGAGTACGACCTGCTGTTACGCCTGAGAAACATCATCGAACAAAATCGCTGCGCGGAGCGGTTCGCCTATGGCC AGACAGATGCGGCAGGACACAACCAGTGCAATCAACTGGTCCGCCATGACGATACGGCGGGCTCGCGCTTGCTGCAGGAT TACAGCCTGCATGGCTCGGTACTCAGTGAAACACGACATTTCATGCTTGCCGCAGAAGCAGCGGACTGGCCATCAGCCGA GCCTGATCGTAATGAGCTGGTGGAGCCGGCCGGCCTTCAGACCTGTCGCGTTTTCAACGCACAAGGTGAAGTGCTGAAGC AGACCGATGCCAGTGGTAATAGCCAGCTTTCGACTCATAATCTGGCCGGTCAGCTGCACAGCACAGACCTGATATTGAAC GACAGCATGCACGCGCGGAAGCTGGTCAGCGCGATTCGCTATAACGCCTTCAACCAGGTCGAACAGGAAACAGCGGGCAA TGGCGTAGTCAGCCTTTACGCCTATGATCAGCAGGACGGCAGGCTGATCGGGCTGAGCGCGATCTCTGCTGACGGCACGC TGCTGCAGCAACTCAATTACAGCTATGACCCGGTGGGCAATATCCTGCTCGTCAACGATGCCTCGCAACCAGACCGGTAT TGCGACAACCAGCTTATCGAACCGATCAGCCGTTACCGTTACGACACTGTGTATAAGTTGATTGAAGCCACTGGCCGGGA GGTCAGAAACGGTGCCAGCCATGGTCCGGCGCTGCCCGGTCTGCAACCTCTGCCGACGCTCGATCCTTGCCAGGTCAGCA ACTACAAACAGAATTACAGCTACGACACTGCAGGCAATCTGCTGCAAATGCGCCACGAAGGCGCACACAACTTCACCCGC AACATGCACGTTGCCCCGGACAGCAATCGCAGCCTGCCCGACGATGACGGAGACGTGGATTTCGCTACGAGTTTTGATGC CAACGGCAATCTGCTGCAACTGGTTCGCGGGCAGGTTATGGGCTGGGATGCGCGTAATCAGTTGCAGCACATCACCACTG TGCAACGTGAAGACGGGTCGAACGATGACGAACGCTATGTCTATGACGGCCAGGGTCAACGTTGTCGCCTGATCAGTACT GCTCAGGCATCAGGTCGCACACTGATCAATGAAGTGCGCTACCTGCCGGGGCTGGAAATTCGTACTACGGCCGATGGCGA AATCCTTCATGTCGTTACAACTCAGGCGGGTCGCAACAGTGTGCGGGTGTTGCACTGGGAGGCTGGAAAACCGGATTCTA TTGCGAACGATCAGGTGCGTTACAGCCTGGGTGATCATCTGGGCTCAAGCACGCTGGAGCTTGATCAGCAAGGCGGTCTG ATCAGCCAGGAAAATTATTACCCCTTTGGTGGCACGGCCTGGTGGGCGGCGCGCAGTGCGGTGGAAGCGAAGTACAAGAC AGTGCGTTACTCGGGTAAGGAGCGCGATGCGAGCGGGCTTTATTATTACGGGTTCAGGTATTACGCGCCGTGGCTGCAGC GGTGGATCAATCCGGATCCGGCGGGGGATGTGGATGGGTTGAACGCCTATAATTTCGTATCGAACAACCCCGTCATGTTA ATAGACAAAGATGGGAGAGTAGGCGAGCGAATCGCCGCAGCATACGCACCAAACGAACCCGCCCTTCCTTCATACTTTAA AGACACCTACTTATCCGAAGCCTCTAACGATCAAGTGACTGCGGACGCCAGAGCCGGAGCGCTGTGGAATGACCCTCCCA GGTTCCTGGGAGCAGGGTACGCATACGCACCTGCCTGGTACTACAATGCCAACCTGCAGCAGCGTATAGACTTGTTGAAT GAGCGCTCATGGATGAGCCACGGCATCGTTACAACACTATTCAATCATGATCATGACACTGTCAAAAAACCCTACGAAAT AACATCCAGACACTGGAATAACGTTGATGAATTCACGAACACTTACACACCCGAAAAGTGGATGATTCAATCCAATTTTA AAGCCAGCAAATCGAATGACTACCATGCGAGCGATGTTATTCGATATCAATATGAGACCGTGTCAAAATCATTGGGTTTC TTTGGAGTGTTACCTTCCCTTGTAGAAAACCAATACGTTATGAACACAAAAACCCTCAGCATCACCTCTGGGCTTGAATC CAGCACTCCTCACCTGTTAGACCTCTACCTCAATGAAACGGCGATCGGTAAAGGGACAAGTATTTCACTGACCGAGTTTC AAATGGAGGCAATGTGGGTGCAGCGCCAAATAGACCCCGTACTGGATCCGATCAGCCATTTTACGCTCGGAGTGAAACCC ATCAATCATTTTAAATTGTAG Protein sequence : MVNSAVHSHTPELLVSEVRGLVVRQVLLHRTEAAEAAAMRVTRQRFDLAGRMIAATDPRLASANRSTVYSLGGNTLATES VDAGWRVALFGEAGQVLNGWDARGNERQLEYDLLLRLRNIIEQNRCAERFAYGQTDAAGHNQCNQLVRHDDTAGSRLLQD YSLHGSVLSETRHFMLAAEAADWPSAEPDRNELVEPAGLQTCRVFNAQGEVLKQTDASGNSQLSTHNLAGQLHSTDLILN DSMHARKLVSAIRYNAFNQVEQETAGNGVVSLYAYDQQDGRLIGLSAISADGTLLQQLNYSYDPVGNILLVNDASQPDRY CDNQLIEPISRYRYDTVYKLIEATGREVRNGASHGPALPGLQPLPTLDPCQVSNYKQNYSYDTAGNLLQMRHEGAHNFTR NMHVAPDSNRSLPDDDGDVDFATSFDANGNLLQLVRGQVMGWDARNQLQHITTVQREDGSNDDERYVYDGQGQRCRLIST AQASGRTLINEVRYLPGLEIRTTADGEILHVVTTQAGRNSVRVLHWEAGKPDSIANDQVRYSLGDHLGSSTLELDQQGGL ISQENYYPFGGTAWWAARSAVEAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGDVDGLNAYNFVSNNPVML IDKDGRVGERIAAAYAPNEPALPSYFKDTYLSEASNDQVTADARAGALWNDPPRFLGAGYAYAPAWYYNANLQQRIDLLN ERSWMSHGIVTTLFNHDHDTVKKPYEITSRHWNNVDEFTNTYTPEKWMIQSNFKASKSNDYHASDVIRYQYETVSKSLGF FGVLPSLVENQYVMNTKTLSITSGLESSTPHLLDLYLNETAIGKGTSISLTEFQMEAMWVQRQIDPVLDPISHFTLGVKP INHFKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 3e-101 | 42 |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 8e-101 | 42 |
