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Name : PSPTO_4340 (PSPTO_4340) Accession : NP_794096.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : insecticidal toxin protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 4891381 - 4894203 bp Length : 2823 bp Strand : - Note : see PMID:20190049 for expression data; similar to GP:3265044, and GP:16416915; identified by sequence similarity; putative DNA sequence : ATGAGCTCGATCACGCACACCAACACGCCGCAATTGGCGGTCAGCGATTCACGGGGTCTGCCGGTACGCAGTGTGCAGTT CTATCGTGGCGCTGATGGTCAGCCTGTTGACGCGAGGGTGACGCAGCACTATTTCGACAAGGCCGGGCGACTGATCGCCA GTCGCGATCCACGTTTTTCCAGTCGTTTGAAATACGGTGTCTGTGCGCCTGTGAACCTGATGCAAATCGTCAGCTTGTCC GGGGCTTTGCTGTTATCGAAAAGTGTCGATTCAGGTTGGCGGGTGAGCCTGAACGGCGAAGCGGGGCAGTTAGTCGACAG CTGTGACGGACGTGACAACCCGCGCCAGATCGAATACGACGGGCTGTTGCGCCCTTTGGCGATCAACGAATCAGGCCGAA TGACCGAGCGCTTCACTTATGGCGGGCCTGCCACTGCTGAGCATAACCAGTGCAATCAACTGATTCGCCATGACGATACG GCAGGCTCGCGCTTGCTGCGGGACTATGGACTGTCGGGTAGGGCGTTGAGCGAAAAAAGGTACTTCCTGCAGTCGCCCGA CAGCCCGGACTGGCCACTTGCCGAGCCTGATCGTGATGCACTGCTCGAGCCGGTCGGCCTGCAGACGCGCTGGGCTTTCA ACGCGCAGGGCGAGGACCTGGCGCAGACTGACGCAAACGGTAATGTCCAGCGTTTCAGTCACGGTGTGGCTGGGCAACTG CACGCTGTTGAACTGACCCTGGCCAATACGGCACAGCGGCAAACGCTGGTCAGTGCAATTCACTACGACGCGTTCAATCA GGCCGAGCAGGAGACGGCAGGAAATGGTGTGGTCAGTCGCTATGTGTATGATCAACAGGACGGTCGGCTGACTGAGCTCA GTGCGCTATCTGCCGACGGCTCAGTGTTGCAAAAACTGAACTACAGCTATGACCCGGCAGGTAACGTTCTACTCATCAAC GATGCCTCGCAACCAGACCGGTATTGCGGCAATCAGCGTATCGAGCCGATAAACCGTTACTGTTACGACACGTTGTATCA GTTGATCGAAGCCACGGGGCGGGAGGTCAGAAACGGGGCCAGCCATGGTCCGGCGCTACCCGGTCTGCAACCTCTGCCGA CGCTCGATCCTTGCCAGGTCAGCAACTACACACAGCGTTACAGCTACGACGCTGCGGGTAACCTGCTGCAAATGCGCCAC GAAGGCGCGCACAACTTCACCCGCAACATGCACGTTGATCCCGACAGCAATCGCAGCCTGCCCGACAATGACAGGTATGT GGATTTCGCCACGAGTTTTGATGCCAACGGCAATCTGCTGCAACTCGTGCGTGGGCAGACCATGAGCTGGGATGTGCGTA ATCAGTTGCGGCAAATCACTACCGTGCAACGTGAAGACGCACCGAATGATGAAGAGCGCTATGTATACGACGGCCAGGGC CAGCGCTGCCGCAAGATCAGCACCGCGCAGGCATCAGGTCGCACACTGACCAATGAAGTTCGCTACCTGCCGGGACTGGA AGTTCGGACCACGGCCGATGGAGAAACTCTTCACGTCGTTACGGCTCAGGCGGGTCGCAACAGCGTGCGGGTGTTGCACT GGGAAGCCGGAAAACCAGGCGCTATTGCGAACGATCAGGTGCGTTACAGCCTGGGTGATCATCTGGGCTCGAGCACGCTG GAGCTTGATCAGCAAGGCGGCCTGATCAGCCAGGAAAGTTATTACCCCTTTGGCGGCACGGCCTGGTGGGCGGCGCGTAG TGCAGTGGAGGCCAAGTACAAAACAGTGCGTTATTCGGGTAAAGAGCGCGATGCCAGCGGGCTTTATTATTACGGGTTCA GGTATTACGCGCCGTGGTTGCAGCGGTGGATCAATCCTGACCCGGCGGGGGATGTGGATGGGTTGAATCTGTACAGGATG GTCAGAAATAATCCGCTTGTTTACGTTGATGCGAAGGGCCAGCAACCTGAACCTGTTCCAAAAACTATTCACCAGATCTG GATAGGTGAAAACAAGAATGCCTTGAGAGCTCAGGTTAGCAATATCAACAGAACCGTTGAAATGGCTTGGGGGTATAAAG TGAAGTTGCATCTGGAAACGAGGACGCCGGAAGCTTATTCGGAAATCGAAAAGGATCTGAGATCCGAAGTGGTTCTGCTT CCTGATTCCCAGGTTTTTCAAAACTTCAAGGAGAAGCCGCTTTATGCGGCCTATGAAGATTTCCGAAGAAACAATCAGAA TTACGCTTTCGCGGTAGACGTTTTACGTATGCATACCGTTCATGAGTTGGGCGGGATTTATTCAGATGTCGATGACGTTT ATGCAGGTGCGGAGACTGGCGGAATGACGCAGTTGGGGGATAATCCGCTGTTTGCAGAACCTGATGAGGTTTTGACGCTG GATCCTGTTCATGTCCCTTGGGAGCCCCAGAATTCTGTTGAAAGTTTTATGGTCAATAACAGCTCATTTGCCGCTCATTC AGGTGCAGGCGTCTTACTTGACATGATGGGGGAAGGAGCGAAACGATATGATGAAGCCGTTGAGGGCGGAAGTTATCCGG ATCCGACGGGCATGAACGGTATAGGTCTAAGTCTGCTCTGGAATCCTAACCCGGCAGTAAGAGTTCGAACGTTATCGAAT GTAGTAGGCCCCGGCTTGTTTACAGACACACTGCACGCTTCGGACACAGCATACGGTGAGCTTTTTAGTAATCTGAAAGG CGTCGTCTTTCAAAAACAGCCGTTCACGTTTGCCGACCAAATGGCCAGGAAGATGCCGCTGCATCGGCATATAAAAAGCG GCGCGGCGCAAACCTGGCGCTGA Protein sequence : MSSITHTNTPQLAVSDSRGLPVRSVQFYRGADGQPVDARVTQHYFDKAGRLIASRDPRFSSRLKYGVCAPVNLMQIVSLS GALLLSKSVDSGWRVSLNGEAGQLVDSCDGRDNPRQIEYDGLLRPLAINESGRMTERFTYGGPATAEHNQCNQLIRHDDT AGSRLLRDYGLSGRALSEKRYFLQSPDSPDWPLAEPDRDALLEPVGLQTRWAFNAQGEDLAQTDANGNVQRFSHGVAGQL HAVELTLANTAQRQTLVSAIHYDAFNQAEQETAGNGVVSRYVYDQQDGRLTELSALSADGSVLQKLNYSYDPAGNVLLIN DASQPDRYCGNQRIEPINRYCYDTLYQLIEATGREVRNGASHGPALPGLQPLPTLDPCQVSNYTQRYSYDAAGNLLQMRH EGAHNFTRNMHVDPDSNRSLPDNDRYVDFATSFDANGNLLQLVRGQTMSWDVRNQLRQITTVQREDAPNDEERYVYDGQG QRCRKISTAQASGRTLTNEVRYLPGLEVRTTADGETLHVVTAQAGRNSVRVLHWEAGKPGAIANDQVRYSLGDHLGSSTL ELDQQGGLISQESYYPFGGTAWWAARSAVEAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGDVDGLNLYRM VRNNPLVYVDAKGQQPEPVPKTIHQIWIGENKNALRAQVSNINRTVEMAWGYKVKLHLETRTPEAYSEIEKDLRSEVVLL PDSQVFQNFKEKPLYAAYEDFRRNNQNYAFAVDVLRMHTVHELGGIYSDVDDVYAGAETGGMTQLGDNPLFAEPDEVLTL DPVHVPWEPQNSVESFMVNNSSFAAHSGAGVLLDMMGEGAKRYDEAVEGGSYPDPTGMNGIGLSLLWNPNPAVRVRTLSN VVGPGLFTDTLHASDTAYGELFSNLKGVVFQKQPFTFADQMARKMPLHRHIKSGAAQTWR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 2e-106 | 44 |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 3e-100 | 43 |
| TccC2 | AAL18492.2 | TccC2 | Virulence | tcd island | Protein | 2e-93 | 41 |
| TccC5 | AAO17210.1 | TccC5 | Virulence | tcd island | Protein | 2e-95 | 41 |
