Gene Information

Name : PSPTO_3966 (PSPTO_3966)
Accession : NP_793731.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : ISPsy5, Orf1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 4474543 - 4474902 bp
Length : 360 bp
Strand : +
Note : The gene assignment is based on its position in a multicopy insertion sequence, directly adjacent to an ORF matching an HMM for an IS66 family transposase; similar to GP:5824138; identified by sequence similarity; putative

DNA sequence :
ATGATGCGACCCGACGCCAAAGTCGAAAAAGTGTACCTCTACCCCAAGCCTGTGGATTTCCGAAAATCTATCGATGGCCT
TGCTGCGCTGGTTGAACTGGACATCAAAGTCGCCGTGTTCGACCCCGTGCTTTTTGTTTTTCTGAATCGCCACCGTAACC
GGGTGAAAATACTTTATTGGGAGCGCAACGGCTTCTGTCTTTGGCTCAAGCGTTTGGAGTCCGAGCGGTTCAAAACCTCT
CCCGATGAGACGGACGAGGCCATCGTGCTGACGGTCCAGGAACTGAACTGGTTACTGGATGGATTTGATCTCTGGCGTAA
CCGTCCGCACAAGGTTTTGACTCCACGATTTGTCGCCTGA

Protein sequence :
MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVLFVFLNRHRNRVKILYWERNGFCLWLKRLESERFKTS
PDETDEAIVLTVQELNWLLDGFDLWRNRPHKVLTPRFVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 3e-49 98