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Name : PSPTO_3949 (PSPTO_3949) Accession : NP_793715.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : site-specific recombinase, phage integrase family Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 4457531 - 4458574 bp Length : 1044 bp Strand : - Note : see PMID:20190049 for expression data; similar to GP:48994, GB:L07868, and PID:337360; identified by sequence similarity; putative DNA sequence : TTGGGGGAATTATGGGGGAATGGGGGAGGATGTTATTCCCCCGTACCACCGGTTATGATTCCGTTTATGGCCTATTACGA AAAGCGTGGCGACGCCTGGCGCGCCCAGATACGACGCAAAGGATATCCGACGTTATCCGCAACCTTCGACACCAAAGCAG AAGCCCAGCGCTGGGCTGCTGAACTCGAAGGTGATATGTCGCGCGCGAGATTTGTGGACGTGCGTGAGGCTGAAGCAACC AGTCTGGCCACAGCTCTTGAGCGGTACGAATCAGAAGTCACAGAGAGCAAGAAGGGAGCCAAGCAAGAAAGGGTTCGCAT CAAGAAGTGGATGGAGTCCAAGTTCGCGGGTAAATCATTGGCTTCTTTACGATCGAGCGATATGGCCTCCTATCGTGATG CAGAGATCAAAGCTGGCCGATCCACTGCTACCGTCCGTCTTGACCTCGCGGTCATCAGCCATCTTTACACCGTCGCGACA AAGGACTGGGGTATCGAAGGGCTGACGAATCCATGTCGGGCATTGCGTATGCCCAAAGGCAGCAAGCAGCGAGAACGCCG GCCGACTGCCGATGAATTGAAGTCGCTATACAAGGCTGCCGGCGAAATCAGTCCAGAGTTGCCAGTTATCATCGAGCTGG CTGTTGAGACGGCGATGCGCCGATCCGAGCTGGTCACATTGCGTAAGGATCAAATTCAGGGAAAGGTAGCTTTCCTTGAG GACACGAAGAACGGCGAGCGCCGGTCAGTGCCGCTTTCATCGAGAGCGCGCGAGCTGATAGAGGGGGTGCCTGCGCCTAT CAAGGGCGGGCCACTGTTCCGGCTTAAGGCCGATACGGTCAGTAACTACTTCCCGCTCGCTTGCGAGAAGGCGAATATCC AAGGGCTCCGCCTTCATGACCTGCGGCATGAAGCCACAAGCCGCCTGTTTGAGCGCGGCTTCACCATGATGGAAGTTGCC AGCATAACCGGGCACAAAACTCTTGCGATGCTGAAGAGGTATACCCATTTAAGCCCGCAAGACCTCGCTGAAAAGCTCGG TTAA Protein sequence : MGELWGNGGGCYSPVPPVMIPFMAYYEKRGDAWRAQIRRKGYPTLSATFDTKAEAQRWAAELEGDMSRARFVDVREAEAT SLATALERYESEVTESKKGAKQERVRIKKWMESKFAGKSLASLRSSDMASYRDAEIKAGRSTATVRLDLAVISHLYTVAT KDWGIEGLTNPCRALRMPKGSKQRERRPTADELKSLYKAAGEISPELPVIIELAVETAMRRSELVTLRKDQIQGKVAFLE DTKNGERRSVPLSSRARELIEGVPAPIKGGPLFRLKADTVSNYFPLACEKANIQGLRLHDLRHEATSRLFERGFTMMEVA SITGHKTLAMLKRYTHLSPQDLAEKLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rci | NP_458640.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 8e-38 | 42 |
| rci | NP_807850.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 8e-38 | 42 |
| rci | AAC38070.2 | Rci | Not tested | SPI-7 | Protein | 6e-38 | 42 |
