Gene Information

Name : PSPTO_3593 (PSPTO_3593)
Accession : NP_793372.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Resistance
Product : sulfate permease family protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 4052158 - 4053603 bp
Length : 1446 bp
Strand : -
Note : identified by match to PFAM protein family HMM PF00860

DNA sequence :
ATGAAAACTATCCGTATGCGTGCCGAAGTCCTGGCCGGGCTCACCACATCCTTCGCGCTGGTGCCCGAGTGCATTGCCTT
TGCGCTGGTTGCCCATCTCAACCCGCTGATGGGGCTTTACGGTGCGTTCATCATTTGCACGCTGACCGCGTTGTTCGGTG
GGCGTCCGGGCATGGTCTCAGGTGCGGCCGGTTCGATGGCGGTGGTGATCGTGGCGCTGGTGGTGCAGCAGGGCGTGCAG
TACCTGCTGGCGACCGTGCTGCTTGGCGGCCTGATCATGATTCTGTTCGGGCTGTTGCGGTTGGGCAAGCTGGTGCGGCT
GGTGCCGTATTCGGTGATGCTCGGCTTCGTCAACGGCCTGGCCATTGTGATTGCGATGGCGCAACTGGAGCATTTCAAGG
TCGGCGAATCGTGGCTCAGCGGTACGTCGCTGTACGTGATGCTCGGCCTGGTGGCGCTGACCATGGCAATCGTTTATCTG
CTGCCACGCATCACCCGCGTTGCACCACCGGCGCTGGTGGCGATCCTCAGTGTCGGGCTGGCGGTGTACCTGCTCGGCCT
GCCGACCCGCACCTTGGGCGACATGGCGCACATCGCTGGCGGCCTGCCGGTATTTGCTTTGCCGGACATCCCGTGGAACC
TCGACACCCTGCGTATCATTGCGCCGTACGCGATCCTGATGGCGCTGGTCGGCCTGCTGGAAACCCTGCTGACCCTGAAC
CTCACCGACGAGATCACTGAAACACGTGGCTACCCGGACCGCGAGTGTGTGGCGCTGGGCGCTGCCAACATGGTGTCCGG
TGCTTTCGGTGGCATGGGCGGTTGCGCGATGATCGGCCAGACGGTCATCAACCTCAGTTCTGGCGGGCGCGGTCGGGTTT
CCGGCGTGGTCGCGGGCTTGATGATCCTGATGTTCGTGCTGTTTCTGTCGCCGCTGATAGAGCGCATTCCGCTGGCAGCG
CTGGTGGGTGTGATGTTCGTGGTCGCGCAGCAGACCTTCGCCTGGGCATCGCTGCGCGTGTTGCGCAAGGTGCCGGTCAA
CGACGTGCTGGCGATCATCGCGGTGACGGTGGTTACAGTGCTGACCGATCTGGCCACCGCTGTGGTGTTCGGCATCATCA
TCGCCGCCATCAACTTCGCCTGGCAGCAGGCCCGCGAGCTGTACGCCGACAGCCATGTCGAGGCAGACGGCAGCAAGATC
TACCACCTGCACGGCACGCTGTTCTTCGCCTCGACCACGCCTTTTCTTGACCAGTTCAACCCCTCTGAAGACCCTGCGCA
AGTGACACTGGACTGTCGCCACCTGAGCTTTGTCGATTACTCGGCGATTGCTGCGCTGAAAACCTTGCGTGAGCGCTACG
CCAAGGCGGGCAAGCATTTGCGGGTGGTGCACTTGTCCGACCGCTGCAAGCGTCTGCTCAAGCGCGCGGGCGTGCAGCAC
GCTTGA

Protein sequence :
MKTIRMRAEVLAGLTTSFALVPECIAFALVAHLNPLMGLYGAFIICTLTALFGGRPGMVSGAAGSMAVVIVALVVQQGVQ
YLLATVLLGGLIMILFGLLRLGKLVRLVPYSVMLGFVNGLAIVIAMAQLEHFKVGESWLSGTSLYVMLGLVALTMAIVYL
LPRITRVAPPALVAILSVGLAVYLLGLPTRTLGDMAHIAGGLPVFALPDIPWNLDTLRIIAPYAILMALVGLLETLLTLN
LTDEITETRGYPDRECVALGAANMVSGAFGGMGGCAMIGQTVINLSSGGRGRVSGVVAGLMILMFVLFLSPLIERIPLAA
LVGVMFVVAQQTFAWASLRVLRKVPVNDVLAIIAVTVVTVLTDLATAVVFGIIIAAINFAWQQARELYADSHVEADGSKI
YHLHGTLFFASTTPFLDQFNPSEDPAQVTLDCRHLSFVDYSAIAALKTLRERYAKAGKHLRVVHLSDRCKRLLKRAGVQH
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 6e-52 41
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 8e-54 41
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 8e-54 41
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 6e-54 41
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 6e-54 41