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Name : glnA-1 (PSPTO_0359) Accession : NP_790208.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : - Position : 391090 - 392496 bp Length : 1407 bp Strand : - Note : identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692 DNA sequence : ATGTCGAAGTCGGTTCAACTCATCAAAGATCATGACGTTAAGTGGATTGATCTGCGCTTCACGGACACTAAAGGTACGCA GCACCACGTGACCATGCCAGCTCGCGATGCGCTGGAAGACGACTTCTTCGAAGTCGGCAAGATGTTCGACGGCTCCTCCA TCTCTGGCTGGAAAGGCATCGAAGCCTCCGACATGATCCTGCTGCCGGACGACGAAACCGCAGTTCTGGATCCGTTCACC GAAGAGCCGACCCTGATTCTGGTGTGCGACATCATCGAACCGTCGACCATGCAAGGTTACGACCGTGACCCACGCGCCAT TGCTCGTCGCGCCGAGGAATACCTGAAGTCCACCGGTATCGGTGACACCGTATTCGCAGGTCCGGAGCCAGAATTCTTCA TCTTCGACGAAGTGAAATTCAAATCCGACATCTCCGGTTCCATGTTCAAGATCTACTCTGAACAAGGTTCGTGGATGTCC GACCAGGATGTGGAAGGCGGCAACAAAGGCCACCGCCCTGGCATCAAAGGTGGTTACTTCCCGGTTCCGCCGTTTGACCA TGACCACGAAATCCGTACCGCCATGTGCAATGCTCTGGAAGAAATGGGCCAGACCGTTGAAGTTCACCACCACGAAGTGG CGACCGCTGGCCAGAACGAAATCGGCGTGAAGTTCAATACGCTGGTCAAGAAGGCTGACGAAGTTCAGACCCTGAAGTAC GTTGTTCACAACGTTGCTGACGCTTATGGCCGCACTGCGACCTTCATGCCAAAGCCTCTGTACGGTGACAACGGTTCGGG CATGCACGTGCACATGTCCATCGCCAAAGATGGCAAAAACACCTTCGCAGGTGAAGGCTATGCCGGCCTGTCCGACATCG CGCTGTACTTCATCGGCGGCATCATCAAGCACGGTAAAGCCCTGAACGGCTTCACCAACCCGGCAACCAACTCCTACAAG CGTCTGGTTCCAGGCTTCGAAGCCCCGGTCATGCTGGCCTACTCGGCACGTAACCGCTCTGCCTCGATCCGTATTCCTTA CGTCAACAGCCCACGCGGCCGTCGTATCGAAGCACGCTTCCCGGATCCGGCAGCCAACCCGTACCTGGCCTTCGCGGCTC TGTTGATGGCTGGCCTGGACGGCATCCAGAACAAGATCCACCCTGGCGACGCAGCTGACAAAAACCTGTATGACCTGCCG CCTGAAGAGGCCAAAGAGATCCCACAGGTTTGCGGCAGCCTGAAAGAAGCGCTGGAAGAACTGGACAAGGGCCGTGCGTT CCTGACCAAAGGCGGCGTATTCAGCGACGACTTCATCGACGCTTACATCGCACTGAAAAGCGAAGAAGAAATCCGCGTTC GCACCTTCGTGCACCCACTGGAATACGAGCTTTACTACAGCTGCTGA Protein sequence : MSKSVQLIKDHDVKWIDLRFTDTKGTQHHVTMPARDALEDDFFEVGKMFDGSSISGWKGIEASDMILLPDDETAVLDPFT EEPTLILVCDIIEPSTMQGYDRDPRAIARRAEEYLKSTGIGDTVFAGPEPEFFIFDEVKFKSDISGSMFKIYSEQGSWMS DQDVEGGNKGHRPGIKGGYFPVPPFDHDHEIRTAMCNALEEMGQTVEVHHHEVATAGQNEIGVKFNTLVKKADEVQTLKY VVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSIAKDGKNTFAGEGYAGLSDIALYFIGGIIKHGKALNGFTNPATNSYK RLVPGFEAPVMLAYSARNRSASIRIPYVNSPRGRRIEARFPDPAANPYLAFAALLMAGLDGIQNKIHPGDAADKNLYDLP PEEAKEIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAYIALKSEEEIRVRTFVHPLEYELYYSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 2e-105 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA-1 | NP_790208.1 | glutamine synthetase, type I | VFG1399 | Protein | 7e-103 | 50 |
