Gene Information

Name : PSPTO_3429 (PSPTO_3429)
Accession : NP_793212.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3865036 - 3865278 bp
Length : 243 bp
Strand : +
Note : similar to SP:P12552; identified by sequence similarity; putative

DNA sequence :
ATGACTCCCAACGCATCCCAGCAACGCCAGAGGAAACAAATCATGGCAGCAGCCCAGAACATAGATCGCCTTCTGCGCCT
TGACGAGGTACTTCACACTACGGGCCTCGGTCGGAATACCGTCTATCGCAGAATCAGGGAAGGCACCTTTCCGAAACAGG
TTAGAATAGGCCCTAACTCAGTTGCCTGGCGGCAGTCAGAAATCGCTCGATGGATCACAGATCTATCACCCAGCAACGAC
TAA

Protein sequence :
MTPNASQQRQRKQIMAAAQNIDRLLRLDEVLHTTGLGRNTVYRRIREGTFPKQVRIGPNSVAWRQSEIARWITDLSPSND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 7e-09 44
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 7e-09 44
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 4e-09 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_3429 NP_793212.1 DNA-binding protein VFG1141 Protein 2e-09 44