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Name : serS (PSPTO_3345) Accession : NP_793128.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 3780801 - 3782081 bp Length : 1281 bp Strand : - Note : see PMID:20190049 for expression data DNA sequence : ATGCTCGATTCCAAACTGTTACGTACTCAACTTCAGGACGTAGCGGATCGCTTGGCTTCCCGTGGCTTTACACTGGATGT GGCGCGCATTGAATCGCTGGAAGCCCAGCGCAAGGTGGTGCAGACCCGCACCGAACAGCTTCAGGCCGAGCGCAATGCAC GTTCCAAGTCCATCGGTCAGGCCAAGCAGCGCGGTGAGGACATTGCGCCGTTGATGGCGGATGTCGAGCGTATGGGCAAC GAACTGAGCGAAGGCAAGGTCGAGCTGGACGCCATCCAGGCCGAACTGGACGCGCTGGTGCTGAACATCCCGAACCTGCC TCACGAATCCGTGCCGGTGGGTGCCGACGAAGAAGGCAACGTCGAAGTCCGTCGCTGGGGCACGCCGACGGCGTTCGGCT TCGAGGTCAAGGATCACGTTGCGCTGGGCGAGAAATTCGGCTGGCTGGACTTTGAGACCGCAGCCAAACTGTCCGGCGCA CGTTTTGCGTTGTTGCGTGGCCCGATCGCACGTCTGCACCGCGCATTGGCGCAGTTCATGATCAACCTGCACATCAACGA GCATGGCTACGAAGAGACCTACACGCCTTATCTGGTGCAGGCACCTGCACTGCAAGGCACGGGTCAGTTGCCGAAGTTCG AGGAAGACCTGTTCAAGATCTCGCGTGAAGGCGAAGCTGATCTGTACCTGATCCCGACGGCTGAAGTGTCGCTGACCAAC ATTGTGTCGGGCGAGATTCTCGATGCAAAACAGCTGCCGCTCAAGTTCGTTGCGCACACGCCGTGCTTCCGCAGCGAAGC GGGCGCGTCGGGCCGTGACACCCGAGGGATGATCCGTCAGCACCAGTTCGACAAGGTCGAGATGGTCCAGATCGTTGCAC CGGACGATTCCATGGCGGCCCTTGAATCGCTGACCGGTAACGCCGAACGCGTTCTGCAACTGCTGGAGCTGCCGTATCGC ACGCTCGCGCTGTGCACCGGCGACATGGGTTTCAGCGCCGTGAAGACGTACGACCTGGAAGTGTGGATCCCCAGCCAGGA CAAGTACCGCGAAATCTCTTCGTGCTCCAACTGCGGTGATTTTCAGGCGCGCCGCATGCAGGCTCGCTGGCGCAACCCGG AAACCGGCAAGCCGGAACTGGTTCACACCCTCAACGGTTCGGGGTTGGCGGTAGGTCGTACCCTGGTGGCCGTGCTGGAA AACTATCAGCAGGCGGACGGTTCGATCCGCGTGCCGGAAGTGCTCAAACCGTACATGGGCGGCCTTGAGGTTATCGGTTA A Protein sequence : MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQAKQRGEDIAPLMADVERMGN ELSEGKVELDAIQAELDALVLNIPNLPHESVPVGADEEGNVEVRRWGTPTAFGFEVKDHVALGEKFGWLDFETAAKLSGA RFALLRGPIARLHRALAQFMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSLTN IVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSMAALESLTGNAERVLQLLELPYR TLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMGGLEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-107 | 55 |
