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Name : gspE (PSPTO_3317) Accession : NP_793100.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3748853 - 3750610 bp Length : 1758 bp Strand : - Note : similar to GB:X52541, GB:M80583, SP:P18146, PID:182263, and PID:31130; identified by sequence similarity; putative DNA sequence : ATGTCCCTCCGAAGTAGCAAAATGCCCTCATTCATGCCGTCAGTTCCCGTCGATGTTTCCCGTCTCCTCATTCCGGATGC CGAACAGGTGTGCGCCTGGCTGATCGAAAATGCCGGTCTGAAGACGGCCGATCTGGAGCGCGCGCAACGGTTGCAGCAGG AGTCCGAAGGCACTGAGCTGCTCGGGCTGCTGACCCGGCTCGGCCTGGTGTCTGAATTTGAGCTGGCCCGCGCCTGGGCT GCGTTGTTGCAGGCACCGTTGTTGCTGGCTGACGCCGTGCCACCGCTGCTCGATCCATTGCCGCCGCTGACCGAACGCTT CATGCGCCACTATCAAGTGGTACCCGTGGGCTGGAGCGATCAGGGGCTTCAGGTGCTAAGCGCCAACCCCGGCACGCTGT ACCCGTTTCAGGCCATCGCTTATGCCTGCGAAGTGCCGGTGCGCTTGTCCATCGGGCCGCGCAACGAGGTCGAAACCCTG ATCGAGCGTTATTACGGGCAGGGCCGCTCAGCGATGGGCACCCTGATCGAGAACCTGGACGACGAGGGTGGTTCGCTGGA AGACATTGAACACCTCAAGGACCTGGCCTCCGAAGCGCCGGTCATTCGTCTGGTCAACCTGATTCTGCAACGCGCGGTCG AGCAGCGCGCTTCCGACATTCACATCGAGCCGTTTGAAAGCCAGTTGAAGGTGCGCTACCGAATCGACGGCGTACTGCAT GAAGCCGAAGCGCCACCGTCCAGTTCGTCGGCGGCGGTCATTTCCCGTGTAAAGATCATGGCCCGGCTCGACATCGCCGA GCGCCGATTGCCGCAGGACGGCCGGATCATGCTGCGCATTCAGGGCAAGGAGCTGGACCTGCGGGTGTCCACCGTGCCCA CCAGCTTTGGCGAATCGGTTGTGATGCGTCTGCTGGACCGGCAGACCATCAACTTCGATTTCCCGAGCCTGGGTTTCGAT GGTGAACGGCTGGATGAATTTCTCGATGTGCTGGAGCGTCCGCACGGCATCCTGCTGGTCACCGGGCCGACGGGTTCAGG CAAGACCACCACTCTTTATACGGCGCTGTCACGGCTCAATACCGCCGAGCGCAAGATCATCACCGTTGAAGACCCGGTGG AGTATCAACTCGAAGGCATCAACCAGATTCAGGTCAAGCCCTCCATTGGCCTGGACTTCGCCGGGGCGCTGCGCTCCATC GTGCGTCAAGACCCGGACGTGATCATGATCGGTGAGATGCGCGACCTGGAAACCTGCCGCATCGCCATTCAGTCTTCGCT GACCGGTCACCTGGTGCTGTCGACCCTGCACACCAACAGCGCGGCGGCGAGTATTACCCGTCTGCTGGACATGGGCGTCG AAAGCTACCTGATCGCCTCGACCGTCAATGGCATTCTGGCTCAGCGACTGGTGCGACGACTGGACCCTGCCACCCGTGAA GCCTTCGATGCGCCGCCGGAGCTGATCGCCGAGCACGGGCTGGAGCGTTTTACCGACGAGCGCCCGATTCGCCTGTACCG ACCGCGCGCCGATGCACCGGGCGGCGGTTATCGTGGGCGCAGCGCTATCACCGAGTTGTTGGTGATGAACGAAGAACTGC GCAGCCTGCTGATGCGTCACGCTGACGCGTCCACTCTGGAAGAAGCGGCTCGCCGAGGCGGTTTGCGCACCCTGCATGAA GAGGGCCTGCGCCAGGCAGTGGCCGGGGTGACATCACTGGAGGAAGTGCTGCGCGTGACCCGTGGTGATGGCACATGA Protein sequence : MSLRSSKMPSFMPSVPVDVSRLLIPDAEQVCAWLIENAGLKTADLERAQRLQQESEGTELLGLLTRLGLVSEFELARAWA ALLQAPLLLADAVPPLLDPLPPLTERFMRHYQVVPVGWSDQGLQVLSANPGTLYPFQAIAYACEVPVRLSIGPRNEVETL IERYYGQGRSAMGTLIENLDDEGGSLEDIEHLKDLASEAPVIRLVNLILQRAVEQRASDIHIEPFESQLKVRYRIDGVLH EAEAPPSSSSAAVISRVKIMARLDIAERRLPQDGRIMLRIQGKELDLRVSTVPTSFGESVVMRLLDRQTINFDFPSLGFD GERLDEFLDVLERPHGILLVTGPTGSGKTTTLYTALSRLNTAERKIITVEDPVEYQLEGINQIQVKPSIGLDFAGALRSI VRQDPDVIMIGEMRDLETCRIAIQSSLTGHLVLSTLHTNSAAASITRLLDMGVESYLIASTVNGILAQRLVRRLDPATRE AFDAPPELIAEHGLERFTDERPIRLYRPRADAPGGGYRGRSAITELLVMNEELRSLLMRHADASTLEEAARRGGLRTLHE EGLRQAVAGVTSLEEVLRVTRGDGT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-91 | 45 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-91 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | NP_793100.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-91 | 50 |
| gspE | NP_793100.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-92 | 45 |
| gspE | NP_793100.1 | general secretion pathway protein E | VFG1876 | Protein | 2e-85 | 43 |
| gspE | NP_793100.1 | general secretion pathway protein E | VFG1880 | Protein | 3e-82 | 42 |
| gspE | NP_793100.1 | general secretion pathway protein E | VFG0112 | Protein | 1e-85 | 41 |
