Gene Information

Name : PSPTO_3258 (PSPTO_3258)
Accession : NP_793041.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3682282 - 3683073 bp
Length : 792 bp
Strand : +
Note : similar to GP:15159963, and SP:P15031; identified by sequence similarity; putative

DNA sequence : 
ATGAACGAGTTTGCGCAGTCGCCCCGCTCTTGCGTGCTCGGTTGCTCCGGGCTCGGCTATTCGGTGCGTGGCACGCCCCT
GCTGAGCGATGTCGATCTGAGCATTGCCACAGGCGAGACACTCGCGGTGGTCGGCCCTAATGGTTCGGGCAAATCCACCC
TGCTCAAGCTGCTGGCTGGCATTCAGAAGCCGGGCAGCGGCGCGGTCAGGCTGGGTGAGCAGGCACTCGCCGCGATGAGC
CGCAGAGACGTGGCACGCCTGTTGGCGGTGGTCGAGCAGCAGGCCGAAACCAGCGACGCGGTGACCGTGCTCGACGCCGT
CGAACTGGGCCGCACGCCCTGGCTGTCGGCACTGGAGCCGTGGAGCGCGAATGACGACGCCATCGTGCGTCAGGCCTTGC
AGGATGTGGACATGCTGCACATGCAAAAACGGGCCTGGCACACCCTGTCCGGGGGCGAGCGGCAACGTGTGCACATCGCC
CGAGCGCTGGCACAACGGCCGCAAATTCTGCTGCTGGATGAGCCGACCAATCATCTGGACATCCAGCATCAGCTCACTAT
TCTCGGCCTGGTCAGGGCTTTGCCGGTGACCACGGTGATTGCCCTGCATGACCTGAATCAGGCACTGGACTGCGACCGTG
TCGCCGTTATGGAAAAAGGCCGACTGGTGGCGCTGGGCACGCCGGTCGAGGTACTGACGCCCAAGCGCCTACTGAGCACC
TTCGGCGTCGTGGCGCACTGGCTGACCGACCCCTTCGATGGCGCGAAAATCCTGCGCTTGCGCTCGCGCTGA

Protein sequence : 
MNEFAQSPRSCVLGCSGLGYSVRGTPLLSDVDLSIATGETLAVVGPNGSGKSTLLKLLAGIQKPGSGAVRLGEQALAAMS
RRDVARLLAVVEQQAETSDAVTVLDAVELGRTPWLSALEPWSANDDAIVRQALQDVDMLHMQKRAWHTLSGGERQRVHIA
RALAQRPQILLLDEPTNHLDIQHQLTILGLVRALPVTTVIALHDLNQALDCDRVAVMEKGRLVALGTPVEVLTPKRLLST
FGVVAHWLTDPFDGAKILRLRSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-33 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_3258 NP_793041.1 iron ABC transporter ATP-binding protein BAC0164 Protein 8e-34 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_3258 NP_793041.1 iron ABC transporter ATP-binding protein VFG1042 Protein 8e-34 44