Gene Information

Name : PSPTO_3234 (PSPTO_3234)
Accession : NP_793019.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Resistance
Product : sulfate permease family protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 3653342 - 3654829 bp
Length : 1488 bp
Strand : -
Note : identified by match to PFAM protein family HMM PF03458

DNA sequence :
ATGCTCGAAAAAATCAAAACTACGTGGTTTTCCAACATCCGTGCCGATGTGCTGGCCGGGCTGGTCGTTGCTCTGGCGCT
GATCCCGGAAGCGATCGCGTTCTCCATCATCACGGGCGTGGACCCGAAAGTCGGGCTTTATGCGTCGTTCTGTATCTGTG
TGGTCATTGCGTTTGTGGGCGGCCGCCCGGCGATGATTTCTGCCGCCACAGGGGCGATGGCGTTGCTGATGGTCAACCTG
GTGAAAGATCATGGCCTTCAGTATTTGCTGGCGGCCACGTTGCTGTGCGGCGTGTTGCAGATTATCGCCGGGTACTTGCG
CCTCGGGGAGTTGATGCGCTTCGTTTCGCGCTCGGTGGTCACCGGTTTTGTGAATGCATTGGCGATCCTGATTTTCATGG
CGCAACTGCCAGAGCTCACCCATGTCACTTGGCCGGTCTACGCGATGACCGCCGCCGGGCTGGCGATCATCTACCTGTTT
CCACGCATTCCCGTGGCAGGCAGGCTGCTGCCGTCGCCGCTGGTGTGCATTCTGGTGCTGACAGCCATTGCCATCTACAT
GGGCCTCGACGTGCGGACAGTGGGCGACATGGGCGCAATGCCTGACAGCCTGCCGACCTTCATGTGGCCGGACGTTGCGC
CGAATTTCGACACGTTGCTGATCATTCTTCCGTACTCCGCTGCGCTGGCCGTAGTAGGCCTGCTTGAGTCGATGATGACC
GCAACCATTGTCGATGACCTGACCGACACCAGCAGTGAGCGCAACCGTGAATGCAAAGGGCAGGGCATTGCCAATATCGC
CAGCGGGTTGATTGGCGGCATGGCCGGCTGTGCCATGATCGGTCAGTCGATGATCAACGTGAAATCAGGCGGCAGAACGC
GCCTCTCGACCCTCAGTGCGGGCATTCTGTTGCTGATCATGATGCTGTTTCTGGGCGACTGGCTGGTGCGTATTCCGATG
GCGGCGCTGGTGGCGGTGATGATCATGGTGTCGATCAGTACGTTCAGTTGGGGCTCGATCCGCAACCTCCGGCAGTACCC
GCTCTCGACCAATATCGTGATGGTGGTGACAGTTGCCGTGGTGGTTGCGACCCACAACCTGGCCTACGGCGTATTGGTCG
GATCCCTGCTGGCCGCGATGTTCTTTGCCAGCAAGATCGCGCGTTATCTCGACGTCACATCGCGCCGCGACCCCGAGCAC
AGCCACCGCACGTACTACGTCACTGGCCAGGTTTTTTTCGCCTCCGCCGACCGCTTTACAGCGTCATTCGACTTGCGTGA
GAAGGTTGAAACGCTGGCCATCGATCTGCGCGAGGCGCATTTCTGGGACATCACCGCCGTGGCGGCGCTGGACAAGGTAG
TGCTGAAGCTGAGGAGGGCGGGCATTAGCGTCGACGTCGTTGGCATGAACCGCGCGACGGCCACGCTGGTGGACCGGTTT
GGCGTGCATGACAAGCCGGACGGTATCGATTCGTTGATGGGGCATTGA

Protein sequence :
MLEKIKTTWFSNIRADVLAGLVVALALIPEAIAFSIITGVDPKVGLYASFCICVVIAFVGGRPAMISAATGAMALLMVNL
VKDHGLQYLLAATLLCGVLQIIAGYLRLGELMRFVSRSVVTGFVNALAILIFMAQLPELTHVTWPVYAMTAAGLAIIYLF
PRIPVAGRLLPSPLVCILVLTAIAIYMGLDVRTVGDMGAMPDSLPTFMWPDVAPNFDTLLIILPYSAALAVVGLLESMMT
ATIVDDLTDTSSERNRECKGQGIANIASGLIGGMAGCAMIGQSMINVKSGGRTRLSTLSAGILLLIMMLFLGDWLVRIPM
AALVAVMIMVSISTFSWGSIRNLRQYPLSTNIVMVVTVAVVVATHNLAYGVLVGSLLAAMFFASKIARYLDVTSRRDPEH
SHRTYYVTGQVFFASADRFTASFDLREKVETLAIDLREAHFWDITAVAALDKVVLKLRRAGISVDVVGMNRATATLVDRF
GVHDKPDGIDSLMGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 8e-166 74
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 1e-165 74
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 8e-166 74
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 1e-165 74
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 8e-166 74
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 1e-165 74
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 1e-165 74
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 1e-165 74
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 1e-165 74
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 1e-165 74
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 1e-165 74
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 1e-165 74
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 1e-165 74
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 4e-162 74
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 1e-161 74
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 4e-158 73
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 4e-158 73
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 3e-158 73
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 3e-158 73