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Name : PSPTO_3234 (PSPTO_3234) Accession : NP_793019.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Resistance Product : sulfate permease family protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0659 EC number : - Position : 3653342 - 3654829 bp Length : 1488 bp Strand : - Note : identified by match to PFAM protein family HMM PF03458 DNA sequence : ATGCTCGAAAAAATCAAAACTACGTGGTTTTCCAACATCCGTGCCGATGTGCTGGCCGGGCTGGTCGTTGCTCTGGCGCT GATCCCGGAAGCGATCGCGTTCTCCATCATCACGGGCGTGGACCCGAAAGTCGGGCTTTATGCGTCGTTCTGTATCTGTG TGGTCATTGCGTTTGTGGGCGGCCGCCCGGCGATGATTTCTGCCGCCACAGGGGCGATGGCGTTGCTGATGGTCAACCTG GTGAAAGATCATGGCCTTCAGTATTTGCTGGCGGCCACGTTGCTGTGCGGCGTGTTGCAGATTATCGCCGGGTACTTGCG CCTCGGGGAGTTGATGCGCTTCGTTTCGCGCTCGGTGGTCACCGGTTTTGTGAATGCATTGGCGATCCTGATTTTCATGG CGCAACTGCCAGAGCTCACCCATGTCACTTGGCCGGTCTACGCGATGACCGCCGCCGGGCTGGCGATCATCTACCTGTTT CCACGCATTCCCGTGGCAGGCAGGCTGCTGCCGTCGCCGCTGGTGTGCATTCTGGTGCTGACAGCCATTGCCATCTACAT GGGCCTCGACGTGCGGACAGTGGGCGACATGGGCGCAATGCCTGACAGCCTGCCGACCTTCATGTGGCCGGACGTTGCGC CGAATTTCGACACGTTGCTGATCATTCTTCCGTACTCCGCTGCGCTGGCCGTAGTAGGCCTGCTTGAGTCGATGATGACC GCAACCATTGTCGATGACCTGACCGACACCAGCAGTGAGCGCAACCGTGAATGCAAAGGGCAGGGCATTGCCAATATCGC CAGCGGGTTGATTGGCGGCATGGCCGGCTGTGCCATGATCGGTCAGTCGATGATCAACGTGAAATCAGGCGGCAGAACGC GCCTCTCGACCCTCAGTGCGGGCATTCTGTTGCTGATCATGATGCTGTTTCTGGGCGACTGGCTGGTGCGTATTCCGATG GCGGCGCTGGTGGCGGTGATGATCATGGTGTCGATCAGTACGTTCAGTTGGGGCTCGATCCGCAACCTCCGGCAGTACCC GCTCTCGACCAATATCGTGATGGTGGTGACAGTTGCCGTGGTGGTTGCGACCCACAACCTGGCCTACGGCGTATTGGTCG GATCCCTGCTGGCCGCGATGTTCTTTGCCAGCAAGATCGCGCGTTATCTCGACGTCACATCGCGCCGCGACCCCGAGCAC AGCCACCGCACGTACTACGTCACTGGCCAGGTTTTTTTCGCCTCCGCCGACCGCTTTACAGCGTCATTCGACTTGCGTGA GAAGGTTGAAACGCTGGCCATCGATCTGCGCGAGGCGCATTTCTGGGACATCACCGCCGTGGCGGCGCTGGACAAGGTAG TGCTGAAGCTGAGGAGGGCGGGCATTAGCGTCGACGTCGTTGGCATGAACCGCGCGACGGCCACGCTGGTGGACCGGTTT GGCGTGCATGACAAGCCGGACGGTATCGATTCGTTGATGGGGCATTGA Protein sequence : MLEKIKTTWFSNIRADVLAGLVVALALIPEAIAFSIITGVDPKVGLYASFCICVVIAFVGGRPAMISAATGAMALLMVNL VKDHGLQYLLAATLLCGVLQIIAGYLRLGELMRFVSRSVVTGFVNALAILIFMAQLPELTHVTWPVYAMTAAGLAIIYLF PRIPVAGRLLPSPLVCILVLTAIAIYMGLDVRTVGDMGAMPDSLPTFMWPDVAPNFDTLLIILPYSAALAVVGLLESMMT ATIVDDLTDTSSERNRECKGQGIANIASGLIGGMAGCAMIGQSMINVKSGGRTRLSTLSAGILLLIMMLFLGDWLVRIPM AALVAVMIMVSISTFSWGSIRNLRQYPLSTNIVMVVTVAVVVATHNLAYGVLVGSLLAAMFFASKIARYLDVTSRRDPEH SHRTYYVTGQVFFASADRFTASFDLREKVETLAIDLREAHFWDITAVAALDKVVLKLRRAGISVDVVGMNRATATLVDRF GVHDKPDGIDSLMGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00279 | YP_008211605.1 | Sulfate permease and related transporters (MFS superfamily) | Not tested | AbaR26 | Protein | 1e-165 | 74 |
| sup | AFH57200.1 | sulfate permease | Not tested | AbaR4a | Protein | 8e-166 | 74 |
| ABZJ_00239 | YP_005524195.1 | sul1delta fusion protein | Not tested | AbaR22 | Protein | 1e-165 | 74 |
| sup | AFV47947.1 | sulphate premease Sup | Not tested | AbaR25 | Protein | 8e-166 | 74 |
| ABZJ_00258 | YP_005524214.1 | sul1delta fusion protein | Not tested | AbaR22 | Protein | 1e-165 | 74 |
| sup | AFV47978.1 | sulphate premease Sup | Not tested | delta-AbaR25 | Protein | 8e-166 | 74 |
| ABTW07_3910 | YP_005797158.1 | sul1delta fusion protein | Not tested | AbaR4e | Protein | 1e-165 | 74 |
| sup | AEQ20903.1 | sulphate permease | Not tested | Tn6166 | Protein | 1e-165 | 74 |
| ABK1_0240 | YP_005512812.1 | Sul1delta fusion protein | Not tested | AbaR4d | Protein | 1e-165 | 74 |
| sup | AEZ06030.1 | sulphate permease | Not tested | Tn6167 | Protein | 1e-165 | 74 |
| BJAB07104_00259 | YP_008207724.1 | Sulfate permease and related transporters (MFS superfamily) | Not tested | AbaR25 | Protein | 1e-165 | 74 |
| BJAB07104_00275 | YP_008207740.1 | Sulfate permease and related transporters (MFS superfamily) | Not tested | AbaR25 | Protein | 1e-165 | 74 |
| BJAB0868_00263 | YP_008211589.1 | Sulfate permease and related transporters (MFS superfamily) | Not tested | AbaR26 | Protein | 1e-165 | 74 |
| ABTW07_3869 | YP_005797117.1 | sulfate permease | Not tested | AbaR4e | Protein | 4e-162 | 74 |
| unnamed | AEO37462.1 | Sup* | Not tested | AbaR4 | Protein | 1e-161 | 74 |
| ACICU_00239 | YP_001844898.1 | MFS superfamily sulfate permease | Not tested | AbaR20 | Protein | 4e-158 | 73 |
| sup | ACN81033.1 | sulphate permease | Not tested | AbaR5 | Protein | 4e-158 | 73 |
| sulI | CAJ77098.1 | sulfate permease | Not tested | AbaR1 | Protein | 3e-158 | 73 |
| sup | AGK36657.1 | sulphate permease | Not tested | AbaR26 | Protein | 3e-158 | 73 |
