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Name : PSPTO_3223 (PSPTO_3223) Accession : NP_793008.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : IS52, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 3624316 - 3625293 bp Length : 978 bp Strand : + Note : similar to GP:8885851, and GP:1196750; identified by sequence similarity; putative DNA sequence : GTGCAGAAAACCTTCTCCGAACTCGAATATACCGGCAAGAAAAAGCAGACTCGCCGAGATCGCTTCCTGGCTGACCTTGA ACAGTTGGTGCCCTGGGCCCAGCTGGAGGCGCAAGTGGCGCCGTTTTATAGCAACACCGCAGGCAAGCGCGGACGCCCTG CGATAGGGGTGTCGCGCATGTTGCGCATGTACGTCGTGCAGCAGTGTTTCGGTTTCTCCGATGAAGGTTGCGAAGATGCC GTCTACGACAGCCAGGCCATCCGCGGTTTTATGGGTATCGACCTGGGTCGCGAGTCGGCACCGGATGCCACCACCTTGCT GCGTTTTCGCCGCTTGCTGGAAACCCATCAGCTAACGCGGCTGCTGTTTGAAACGATTAACCAGCATCTGGCCAGCCGGG GGCTGCTGCTCAAGGAAGGCACTATCGTCGACGCTACCCTGATCGCCGCGCCGCCCTCGGTCAAGAACCGAGAAGGCAAG CGTGATCCTGAGATGCATCAGGCCAGGAAAGGCAATCAATGGCACTTCGGGATGAAGGCCCACATTGGTGTAGACGCCAC GTCGGGGCTGGTGCACAGCGTAGTAGGGACGGCCGCTAACGTGGCGGATGTCACCCAGGTTGGCCAGTTGCTGCACGGTG ACGAAACCTATGTTTCGGGTGACGCTGGATACACCGGTGCGGCCAAGCGACCGGAGCATGCTGAACGGGACGTTATCTGG TCGATTGCAGCACGGCCAAGCAGTTACAAGCAGCACGGCGAAGGCAGCGTGCTGTATCGGGTCAAGCGTAAAATTGAATA TGCCAAGGCGCAACTGCGCGCCAAGGTCGAGCACCCCTTCCAGGTAATCAAGGTGCGCTTCAATCATCGCAAGGTTCGCT ACCGTGGGCTGGAAAAGAATACAGCGCAGTTGTTCAGTTTGTTTGGGTTGGCCAATCTGATGCTGGCCAAGCGGTATTTG CAACAGGCGGCAGGATAA Protein sequence : MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWAQLEAQVAPFYSNTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDA VYDSQAIRGFMGIDLGRESAPDATTLLRFRRLLETHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGK RDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYVSGDAGYTGAAKRPEHAERDVIW SIAARPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKVEHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYL QQAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 2e-117 | 100 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 1e-69 | 63 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 9e-70 | 63 |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 2e-83 | 60 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 6e-50 | 45 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 6e-50 | 45 |
