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Name : PSPTO_0327 (PSPTO_0327) Accession : NP_790177.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : S1 RNA binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 356256 - 358577 bp Length : 2322 bp Strand : - Note : see PMID:20190049 for expression data DNA sequence : ATGGACAGCATCAACAGCCGCATCGCCGAAGAACTCGGCGTACGCCCACAACAGGTCGCAGCGGCCGTAGCACTACTGGA TGAAGGCTCGACCGTGCCCTTCATTTCCCGCTACCGCAAGGAAGTGACCGGCAGTCTCGATGACACGCAATTACGCCATC TGGAAGAACGTCTGCGCTATCTGCGCGAACTGGACGACCGGCGCGTCAGCATTCTTGCCAGCATCGAAGAGCAAGGCAAG CTGACCCCGGAACTGGCTCGCGACATCAAGCTGGCCGACACCAAGACCCGCCTTGAAGATTTGTACCTGCCTTATAAGCA GAAACGCCGTACCAAGGGCCAGATCGCCCTTGAAGCGGGCCTCGGCGAGCTGGCTGATGGCCTGTTCAACGACCCGAGCC TGACCCCGGACGCCGAGGCCGCCCGTTTTGTCGACGCCGAGAAAGGCGTGGCCGACGTGAAAGCTGCGCTGGAAGGCGCC AAGTACATCCTGATGGAGCGCTTCGCCGAAGACGCCTCGCTGCTGGACAAACTGCGCAGCTTTCTCAAGCAGGAAGCGGT GATCAGCGCGCGCGTGGTGCCGGGCAAGGAAGAGGAAGGCTCCAAGTTCCGTGACTACTTCGAACACGACGAGCCGCTCA AAAGCATGCCGTCGCATCGCGCGCTGGCAATTTTCCGTGGCCGCAACGAAGGTTTTCTCAGCTCAGCACTGAAAGTCGGT GAAGAACTGCCAGGTGCCATGCACCCGTGCGAACTGATGATCGGCGAGCGTTTCGGCATCCAGAACCAGAGCCGTGCGGC GGACAAATGGCTGGCCGAAGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTATAGCCATCTGGAAACCGATCTGCTGGGTG AGTTGCGTGAAGGCGCTGAAACCGAAGCCATCAACGTGTTCGCCCACAACCTGCACGACCTGCTGCTCGCCGCCCCGGCT GGCCAGCGCGCCACGCTTGGCCTGGACCCGGGCCTGCGCACCGGCTGCAAGGTCGCGGTCGTGGATGCCACCGGCAAACT GCTCGACTACGCGACTGTTTATCCGCATGTGCCGAAAAATCAGTGGGATCAGACCATCGCCGTGCTGGCCGCCCTGTGCG CCAAGCATTCGGTCGACTTGATCGCCATCGGCAATGGCACCGCCAGCCGCGAAACCGACAAGCTGGCCGCCGACCTGATC AAAAAATACCCAGGCCTGAAAATGACCAAGGTCATGGTTTCCGAAGCTGGCGCATCGGTGTACTCGGCGTCGGAACTGGC CGCCAAGGAATTCCCGGACCTCGACGTGTCGATCCGTGGCGCAGTATCGATTGCCCGCCGTTTGCAGGACCCACTGGCCG AACTGGTGAAAATCGACCCGAAATCCATTGGTGTCGGCCAGTATCAGCACGACGTGTCGCAGCTCAAACTGGCTCGCGGC CTGGACGCGGTGGTTGAAGACTGCGTGAACGCAGTGGGCGTGGACGTAAACACCGCGTCGGTGGCGCTGCTGGCGCGAAT TTCCGGCCTCAACACCACGCTGGCGCAGAATATCGTCGCGCATCGCGATGAAAACGGTGCGTTCAAGACCCGCGCAGCGC TGAAGAAAGTCAGCCGTCTGGGCGAGAAGACCTTTGAGCAGGCCGCAGGCTTCCTGCGCGTCATGACCGGTGACAACCCG CTGGACTCTTCTGCCGTTCACCCGGAAGCCTACCCGCTGGTGCAGCGTATTGCGGCTGAAACCGACCGCGACATCCGTTC GCTGATCGGCGACGCCAGCTTTCTCAAGCGTCTGGACCCGAAGAAGTTCACCGACGAGACCTTTGGTCTGCCAACCGTCA CCGACATTCTCCAGGAACTCGAAAAACCGGGCCGCGACCCGCGTCCGGAGTTCAAGACCGCTGAATTTCAGGAAGGCGTC GAGGACCTCAAGGACCTGCAACCGGGCATGATCCTCGAAGGTGTTGTTACCAACGTTACCAACTTCGGTGCTTTCGTCGA CATCGGCGTGCATCAGGACGGTCTGGTGCACATCTCGGCGCTGTCCGAGAAGTTCATCAAGGACCCGCGCGAAGCGGTCA AGGCCGGTGATGTGGTGAAAGTGAAGGTCATGGAAATCGACATCCCGCGCAAACGCGTCGGCCTGTCGATGCGCATGAGC GACACGCCCGGCGAGAAAATCGACGGTGCGCGCGGCGCACGCCCTGGTGCCTCGCCTCGCCAGCAGAACAGCGCCCCGCG CAAGGAAACCACTGCTCCGGCACCGGCCAACAACGCCATGGCCTCGCTGTTCGCCAACGCCAAGCAATTGAAGAAGCGCT GA Protein sequence : MDSINSRIAEELGVRPQQVAAAVALLDEGSTVPFISRYRKEVTGSLDDTQLRHLEERLRYLRELDDRRVSILASIEEQGK LTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADGLFNDPSLTPDAEAARFVDAEKGVADVKAALEGA KYILMERFAEDASLLDKLRSFLKQEAVISARVVPGKEEEGSKFRDYFEHDEPLKSMPSHRALAIFRGRNEGFLSSALKVG EELPGAMHPCELMIGERFGIQNQSRAADKWLAEVVRWTWKVKLYSHLETDLLGELREGAETEAINVFAHNLHDLLLAAPA GQRATLGLDPGLRTGCKVAVVDATGKLLDYATVYPHVPKNQWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLI KKYPGLKMTKVMVSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG LDAVVEDCVNAVGVDVNTASVALLARISGLNTTLAQNIVAHRDENGAFKTRAALKKVSRLGEKTFEQAAGFLRVMTGDNP LDSSAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDPKKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQEGV EDLKDLQPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEIDIPRKRVGLSMRMS DTPGEKIDGARGARPGASPRQQNSAPRKETTAPAPANNAMASLFANAKQLKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
