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Name : PSPTO_3091 (PSPTO_3091) Accession : NP_792885.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : nickel ABC transporter, ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3473979 - 3475625 bp Length : 1647 bp Strand : + Note : - DNA sequence : ATGACTGACAGCCCGCCCCTGATCGACATCCGTCATCTGAGTGTCGCTTACCGCTTCGACGGCCAGACCAACCAGGCCGT GCGCAACGTGTCATTCCAGGTGGCCAGCGGCGAAACCGTGGCGATTGTCGGCGAATCCGGCTCCGGCAAGTCAACCCTGG CCAACGCGATCCTCGGCCTGCTACCGGACAACGCGCGCATCAACGGCGGCGAACTGCATATCGATGGTCACGACCTGAGC CACGCCTCCGAGCGCGAGAGACGTCGGGTTCGCGGCAGTGTGATCGGTCTGGTGCCACAAGACCCGATGGTCAGCCTCAA CCCGACATTGCGCATCGGTCGGCAGATTGCCGAAGCGCTGATTCTGGCCAATGGCCGCCGCTATCCGGCAGTCGATGCCG ATGTGCTGGAATTGCTCCAGCAGGTCGGCCTGGACAAGCCCGTGCTGCGCGCCCGACAGTACCCGCACGAGCTGTCCGGC GGCATGCGCCAACGTGTGTTGATTGCCATTGCGCTGGCCGGCAACCCGCGCCTGATCATCGCTGACGAGCCCACCAGCGC GCTGGATGTGACGGTGCAGCGCAAGATCCTCGATCACCTGCAACGACTGGTCGCCGAACGGGGCATTTCCCTGCTGATCA TCACCCATGACCTCGGCGTGGCAGCCGATCGGGCTGATCGCGTACTGGTGATGAAAAGTGGCGAGCTGGTCGAACAAGGC GCGCCGCAACACATTCTCATCAACCCGGCTCATGCCTACACTCGCGCACTGATTGCCGCAGCACCGGCTTTCGGCCAGCG CAAAAGCCCGGCAGCACCCCGCGTGGTGTCGAGCAATGACACGCCGCTGTTGACCCTGAGCAACATCGGCAAGACCTATC GCTTGCCTTACGTCAAAGGCGAGGATGCCGATTTTCAGGCGTTGCACGACGTCAATTTCAAGGTATATCCGGGCCAAACC CTGGCGATTGTCGGCGAGTCTGGTTCAGGCAAAAGCACTGCGCTGCGCATTGCCCTGGGCCTGGAGAAACCGACCTGCGG GCGAGTGTTGCTTGAAGGACGTGATGTCACCGACCTCGGCTGGCGCGAGTTCAGGCCCTTGCGACGGCGTATCCAGTTGG TGCAGCAAAATCCGTTTGCCGCGCTGGACCCGCACTTTACGTTATTCGAGAGCATCGTCGAGCCACTGGTCTCATTCGGC CTGCTGAAAGGCCGGGAACTAGAACAGGCAGCCCGCCGGTTGATCGAGCGAGTGCACCTGCCAGTGGCTTACCTGGACCG CCTGCCCCGCGAGCTGTCGGGCGGGCAGCGCCAGCGGGTGGCGATTGCCCGAGCGCTGGCGCTGAAACCGGATTTGCTGC TGCTTGATGAGCCGGTGTCGGCGCTCGATGTGTCAGTGCAGGCGCAAATTCTCGACTTGCTGGTAGAGCTGCAAGCCGAA TCCGGCATTGCCTACGTGCTGGTCTCTCACGACCTCGCGGTGGTCGCCAGCGTCGCCCATCAGGTGCTGGTGCTCAAGCA TGGCAAGACCATCGAACACGGCCCGGCCAGCGACGTTTTCGAGCGGCCGGAAGCCGCCTACACTCAAGAATTGATTGCTG CGATACCCGGCCGCCGCCTGGAGCTACAGGCAGCGGCACAGCACTAA Protein sequence : MTDSPPLIDIRHLSVAYRFDGQTNQAVRNVSFQVASGETVAIVGESGSGKSTLANAILGLLPDNARINGGELHIDGHDLS HASERERRRVRGSVIGLVPQDPMVSLNPTLRIGRQIAEALILANGRRYPAVDADVLELLQQVGLDKPVLRARQYPHELSG GMRQRVLIAIALAGNPRLIIADEPTSALDVTVQRKILDHLQRLVAERGISLLIITHDLGVAADRADRVLVMKSGELVEQG APQHILINPAHAYTRALIAAAPAFGQRKSPAAPRVVSSNDTPLLTLSNIGKTYRLPYVKGEDADFQALHDVNFKVYPGQT LAIVGESGSGKSTALRIALGLEKPTCGRVLLEGRDVTDLGWREFRPLRRRIQLVQQNPFAALDPHFTLFESIVEPLVSFG LLKGRELEQAARRLIERVHLPVAYLDRLPRELSGGQRQRVAIARALALKPDLLLLDEPVSALDVSVQAQILDLLVELQAE SGIAYVLVSHDLAVVASVAHQVLVLKHGKTIEHGPASDVFERPEAAYTQELIAAIPGRRLELQAAAQH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-104 | 46 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-70 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-70 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-70 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 8e-70 | 42 |
