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Name : PSPTO_3060 (PSPTO_3060) Accession : NP_792854.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : glycine betaine/L-proline ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 3440841 - 3441878 bp Length : 1038 bp Strand : - Note : - DNA sequence : ATGAGTCATGGCGACGAAATACTCTCAGTCAACAACATTTTCAAGGTCTTTGGTGCTCAGCCAAAGGTCGCAATGGATAT GCTCAAACGCGGTGCCGGCAAAGACGAGATATTCAGCAAGACGGGCCGGGTGGTCGGTGTGTTTGACGCTACATTTTCGG TAAAACGCGGAGAAATCTTCGTGATCATGGGCTTGTCGGGTTCTGGCAAGTCCACCATGGTGCGTCTGTTCAACCGTCTC ATTGAACCCACGTCTGGAACCATTCATCTCAATGGCAAGGAAATTACCGGCCTTTCGGATGAGGCGTTACTGGATGTACG CCGTAAGGAAATGAGCATGGTGTTTCAGTCATTTGCGCTCATGCCGCACTTGACGGTCATTGATAACGCCGCTTTCGGGC TCGAAGTTTCAGGTGTCGCCGAGCAGGAGCGACACGCGCGTGCTCGCGAAGCGCTCGAACAGGTCGGTCTGGCTGGGCAT GAACACAGTTACCCGCATCAGTTGTCTGGCGGTATGCAGCAACGAGTCGGCCTGGCTCGCGCATTGGCCAACGACCCGGC CATCCTGCTGATGGATGAAGCCTTCTCTGCACTGGACCCGCTCATTCGCCACGAGATGCAGGGCGAACTGATACGCCTTC AGGCCGAGCAGCATCGCACCATCATTTTCATCTCCCATGACATCGAAGAAGCTATTCGTATTGGCCATCGCATCGCGATC ATGGAAGGCGGACGCATCGTGCAGATCGGTTCCCCTCAGGAGCTGCTGTGCAACCCGGTCAACGATTACGTCAAAGCATT TTTTCAAGGCTTTGACCGCTCGAAAATTCTTCGGGCGGGCGACGTGGCGACGGTCTGTGCAGAGCATCCTTACGACGCGC ATGCATCCAGACCGACACTGCAATCCGATACCCCTCTGCAAGACATCTTTCACATTGTTGCCGATGCCGTGCATCCGGTC GCTGTTGTGGATCGACACGGTGTGTTCAAAGGCACTATTTCCAAGAGTCTGTTGCTGCAGACAATGAGTCGTCATTGA Protein sequence : MSHGDEILSVNNIFKVFGAQPKVAMDMLKRGAGKDEIFSKTGRVVGVFDATFSVKRGEIFVIMGLSGSGKSTMVRLFNRL IEPTSGTIHLNGKEITGLSDEALLDVRRKEMSMVFQSFALMPHLTVIDNAAFGLEVSGVAEQERHARAREALEQVGLAGH EHSYPHQLSGGMQQRVGLARALANDPAILLMDEAFSALDPLIRHEMQGELIRLQAEQHRTIIFISHDIEEAIRIGHRIAI MEGGRIVQIGSPQELLCNPVNDYVKAFFQGFDRSKILRAGDVATVCAEHPYDAHASRPTLQSDTPLQDIFHIVADAVHPV AVVDRHGVFKGTISKSLLLQTMSRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-36 | 41 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 9e-37 | 41 |
