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Name : PSPTO_3032 (PSPTO_3032) Accession : NP_792827.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 3408146 - 3409723 bp Length : 1578 bp Strand : + Note : - DNA sequence : ATGGCGGAAAACCTGATCGAAATTCGCGACCTGAGCGTCGCTTTCAACGGGCAGCAAGTGGTCAGCCACCTGAGCCTGGA TGTTCGGCGTGGCGAGTGTCTGGCGCTGGTTGGCGAATCCGGCTCCGGCAAGTCCGTCACGGCGCACTCGATCCTGCAAC TGCTGCCCCGCAGTGGCACTGCGACTACCGGCAGCATCACTTACCGTGGTCAACAGCTGGTGGGCGCTGACGAGCGCACC TTGCGCGAGCTGCGGGGCAACCGCATCGCGATGATCTTTCAGGAACCGATGACGTCGCTGAACCCGTTGCACAGCGTGTC CCGACAGATCGGCGAGACATTGCTGCTGCATCGCGGCATCAGTGGCCGTGAGGCGCAGAAGCGCATCATCGAGCTGCTGG AACTGGTCGGGATTCAACAACCGGAGAAACGCCTCAAAGCCTATCCGCATGAGCTGTCCGGCGGACAACGTCAGCGGGTG ATGATTGCCATGGCTCTGGCCTGTGAGCCGGAACTGTTGATAGCCGACGAGCCGACCACCGCGCTGGACGTCACCGTGCA GCGCAAGATTCTCCTGCTGCTCAAAGAGCTGCAGCAGCGCCTGAACATGTCGCTGCTGCTGATCAGTCACGACCTGAATC TGGTGCACAGCGTGGCACAGCGGGTGTGCGTGATGCGCGCAGGCGAGATTGTCGAGCAGGCCGACTGCAAGTCGCTGTTC AAGTCACCCCAACATCCCTACAGCCGCCTGCTGCTGGATGCTGAACCTGCGGGCGAACCGCTGCCACGCGATACGCGGGA AACGGTGCTGCAGGTCGATAACCTGAAAGTCTGGTTCTCCCTGACCGGTGGCGTTCTGCGGCGGCACAAGGAATACCTGA AGGCGGTCGATGACATCAGCCTGAGCATTCAGCGCGGCAAGACGCTGGGCATCGTCGGCGAGTCGGGTTCCGGCAAGTCG ACACTGGGTCAGGCAATCCTGCGTCTGCTGGAGTCGCAAGGCAGCATCCGCTTTCGGGGCCAGGCACTGGACGGCCTCAG CCAGAAGCAGATGCGGCCGTGGCGCAAAGAGATGCAAGTGGTCTTTCAGGACCCTTACGGCAGTTTGAGCCCGCGCATGT CAGTGGCACAGATCATTAGTGAAGGGCTGGAGGTACACAGCCAGTTCAACCCCACACAATGCGATGCCGAGGTGATTCGG GCGCTGGAAGAGGTCGGCATCGACCCGCAGTGCCGCCATCGCTACCCGCACGAGTTCTCCGGCGGCCAACGCCAGCGCAT CGCCATTGCCCGGGCGCTGGTGTTGAAACCGGCGCTTATTCTGCTCGACGAGCCCACGTCTGCGCTGGACCGCACGGTGC AGAAACAGGTGGTTGCCCTGCTGCGCGACCTCCAGCAGAAGCACGGGCTGACGTACCTGTTCATCAGCCACGACCTGGCA GTCGTCCAGGCCCTGGCCCACGACGTCATCGTGGTCAAGGACGGCAAAGTGGTCGAACGCGGCGCCAGCCACGACGTTTT CGAATCGCCGCAGCACCCGTACACACAGGAATTGCTGGCGGCTGCGCACCCCGAATGA Protein sequence : MAENLIEIRDLSVAFNGQQVVSHLSLDVRRGECLALVGESGSGKSVTAHSILQLLPRSGTATTGSITYRGQQLVGADERT LRELRGNRIAMIFQEPMTSLNPLHSVSRQIGETLLLHRGISGREAQKRIIELLELVGIQQPEKRLKAYPHELSGGQRQRV MIAMALACEPELLIADEPTTALDVTVQRKILLLLKELQQRLNMSLLLISHDLNLVHSVAQRVCVMRAGEIVEQADCKSLF KSPQHPYSRLLLDAEPAGEPLPRDTRETVLQVDNLKVWFSLTGGVLRRHKEYLKAVDDISLSIQRGKTLGIVGESGSGKS TLGQAILRLLESQGSIRFRGQALDGLSQKQMRPWRKEMQVVFQDPYGSLSPRMSVAQIISEGLEVHSQFNPTQCDAEVIR ALEEVGIDPQCRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRDLQQKHGLTYLFISHDLA VVQALAHDVIVVKDGKVVERGASHDVFESPQHPYTQELLAAAHPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-97 | 43 |
