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Name : PSPTO_2971 (PSPTO_2971) Accession : NP_792768.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : ISPsy5, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 3339238 - 3340791 bp Length : 1554 bp Strand : + Note : identified by match to PFAM protein family HMM PF03050 DNA sequence : ATGCGACCATTGCCCGACAACCTTCCTGACGATCCCGTATTGCTCAAACAGATGCTGCTTGAGAGCTACGAAGCACGCTC GCGCGAACAGGAAGTTAAAGACGCCTACGCCACTCACATCGTTGATCTCAAAGAGCAGATCAAGCTGCTGCGTGACCGTA TTTTTGGTCGAAAGTCCGAACAAACCGTCGAGCCTAATACCCCTCAACTTGCCTTGTTCAATGAACCTGAAAGCGAGCCT ATGCTCCCGGTCGGCGATGCTGATGAGGAAGTAGTTGCTCCTGCGCCACGCCGTGGCAAGCGCAAGCCACTGTCGGCTGA TCTGCCGCGCATTGAAGTCATCCACGAGCTGCCCGAACACGAACTGACCTGTGCCTGCGGTTGCCGCAAGCATGTCGTCA GCGAGGAAACCAGCGAGCAACTGGATATCGTGCCGATGCAGATTCGGGTGATCAAACACATCCGCAAAGTCTACGGCTGT CGTGGCTGTGAGTCGGCACCGGTCACAGCCGGCAAGCCTGCGCAGTTGATTGAAAAGAGCATGGCCAGCCCCAGCGTGTT GGCCATGCTGCTGACCACCAAGTATGTCGACGGCTTGCCGCTGCATCGTTTTGAAACGGTGCTAAGCCGACATGGCATAG AAATCCCGCGTCAAACGTTGGCCCGCTGGATTATCCAGTGCGGCGAACATTTGCAGCCGCTGTTAAATCTGATGCGTGAT CGATTGCTGGAAAGCCCGGTCATCCACTGTGACGAAACCCGCGTTCAGGTACTGAAAGAACCAGATCGAGACCCGACCAG CCAATCCTGGATGTGGGTACAGGCCAGCGGGCCTCCAGATCATAAAGTCGTATTGTTCGACTACACTTCCAGCCGCGCGC AGGACGTACCGTTACGGCTGCTGGAAAGTTATCGCGGCTATGTGATGACTGATGATTACGCGGGCTATAACGCGCTGGCG TTACAACCGGGCGTGGAGCGCTTGGCGTGTATGGCCCATGCGCGGCGCAAATTTGTCGAAGCACAAAAAGTGCAACCTAA GGGCAAGACCGGGCGTGCCGATATCGCGCTGACGATGATCAATAAGCTGTACGGTATCGAGCGCGAATTGAAAGACGGCA GCGACGAACAGCGCTTTACCGGTCGGCAGGAGAAAAGCCTGCCAATCTTGGCTCAGTTGAAAAGCTGGCTGGATAAAACT CAGTCCCACGTGACGCCGCAAAGCGTGCTGGGCAAGGCAGTTGGTTATCTGGCGAATAACTGGAGTCGGCTGAAGCGTTA CGTGGAAGCCGGCTTTTTACCGATCGACAACAACCCGGCAGAGCGCGCAATAAAGCCGTTTGTTATTGGGCGCAAAGCCT GGCTGTTCAGCGACACGCCTAAAGGCGCCACCGCCAGTGCACAGATCTATAGCTTGGTCGAGACCGCCAAGGTCAACGGC CAGGAGCCCTATACGTGGCTGCGCCACGTACTGGAGAGGTTGCCACTTGCGCAGTCGGTGGCCGACTATGAGGCGTTGCT GCCGTGGAACTGCTCACCGGAAATGCCAAGATAA Protein sequence : MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLKEQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEP MLPVGDADEEVVAPAPRRGKRKPLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQTLARWIIQCGEHLQPLLNLMRD RLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQASGPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALA LQPGVERLACMAHARRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQLKSWLDKT QSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVETAKVNG QEPYTWLRHVLERLPLAQSVADYEALLPWNCSPEMPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71494.1 | unknown | Not tested | Hrp PAI | Protein | 0.0 | 90 |
