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Name : gabD-2 (PSPTO_0300) Accession : NP_790150.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 325765 - 327207 bp Length : 1443 bp Strand : + Note : see PMID:20190049 for expression data DNA sequence : ATGCAGCTTAAAGATTCCACCCTGTTCCGCCAGCAAGCCTACATCAACGGCCAGTGGCTGGATGCGGACGGTGGTCAGTC GATCAAGGTCAACAACCCGGCGACCAACGAGATCCTCGGCACTGTGCCGAAAATGGGCGCGGCCGAGACGCGTCGGGCGA TTGAGGCGGCTGACAAGGCGCTGCCGGCCTGGCGTGCGCTGACCGCCAAAGAGCGCGGTAACAAGCTGCGTCGCTGGTTC GAGCTGATGATCGAGAATCAGGACGACCTGGGTCTGCTGATGACCCTGGAGCAGGGCAAGCCGCTGGCTGAGGCCAAGGG CGAGATCACGTATGCAGCGTCGTTTATCGAGTGGTTCGCTGAAGAAGCCAAGCGCGTGTACGGCGATGTGATCCCCGGTC ACCAGCCGGACAAGCGTCTGATTGTGCTCAAGCAGCCGATTGGTGTGACGGCGGCGATTACGCCGTGGAATTTCCCGGCA GCGATGATCACCCGCAAGGCCGGCCCTGCGCTGGCGGCGGGTTGCACGATGGTGCTCAAGCCTGCGTCGCAAACGCCGTT TTCTGCGTTGGCGCTGGCTGAACTGGCCGAGCGTGCGGGTATTCCGGCCGGCGTGTTCAGCGTGGTGACGGGCAGCGCGG GCGATATCGGCAGCGAGCTGACCGGTAACCCGATCGTGCGTAAATTGTCCTTCACGGGTTCGACCGAGATCGGTCGCCAG TTGATGGCTGAATGCGCCAAGGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCCTTTTATCGTGTTCGACGA CGCCGACCTCGACAAGGCCGTCGAAGGCGCGATGATCTCCAAGTACCGCAACAACGGTCAGACTTGCGTCTGCGCCAACC GCATCTATGTGCAGGACGGCGTGTATGACGCATTCGCCGAGAAGCTCAAGGTGGCGGTCGGCAAGCTGAAAATAGGTAAC GGCCTGGAAGACGGCATTACCACTGGCCCGTTGATTGATGAAAAGGCCGTGGCCAAGGTCAAGGAGCACATTGCCGACGC TGTCAGCAAAGGTGCGACCGTGCTGACCGGTGGCAACAGCCTGGAAGGCTCGTTCTTCGAGCCGACTATTCTGGTCAATG TGTCGAAAGATGCCGCCGTTGCCCGAGAAGAGACGTTCGGTCCGCTGGCCCCACTGTTCCGTTTCAAGGACGAGGCTGAG GCGATTGCGCTGGCCAACGATACCGAGTTCGGTCTGGCGTCGTACTTTTATGCGCAGAACATGAGCCGCGTGTTCCGGGT GGCCGAGGCGCTGGAATATGGCATGGTGGGTATCAACACCGGCCTGATCTCCAACGAACTGGCACCGTTCGGCGGGATCA AGTCGTCCGGCCTGGGCCGTGAAGGTTCCAAGTACGGCATTGAAGATTATCTGGAAATCAAATACCTCTGCCTGTCGGTC TGA Protein sequence : MQLKDSTLFRQQAYINGQWLDADGGQSIKVNNPATNEILGTVPKMGAAETRRAIEAADKALPAWRALTAKERGNKLRRWF ELMIENQDDLGLLMTLEQGKPLAEAKGEITYAASFIEWFAEEAKRVYGDVIPGHQPDKRLIVLKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAERAGIPAGVFSVVTGSAGDIGSELTGNPIVRKLSFTGSTEIGRQ LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAMISKYRNNGQTCVCANRIYVQDGVYDAFAEKLKVAVGKLKIGN GLEDGITTGPLIDEKAVAKVKEHIADAVSKGATVLTGGNSLEGSFFEPTILVNVSKDAAVAREETFGPLAPLFRFKDEAE AIALANDTEFGLASYFYAQNMSRVFRVAEALEYGMVGINTGLISNELAPFGGIKSSGLGREGSKYGIEDYLEIKYLCLSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-158 | 67 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 8e-86 | 41 |
