Gene Information

Name : PSPTO_2842 (PSPTO_2842)
Accession : NP_792645.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : ISPsy14, transposition helper protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 3193490 - 3194245 bp
Length : 756 bp
Strand : +
Note : similar to SP:P55923, GB:X73124, SP:P39592, PID:413948, and GB:AL009126; identified by sequence similarity; putative

DNA sequence : 
ATGCTACCGAATCCAACGCTCGACAAGCTACAAACCCTGCGCCTGCACGGCATGATCAAGTCGCTGGGCGAGCAACACGC
AACGCCCGATATCAATGACTTGAGCTTCGATGAACGCCTCGGCCTGATGGTCGACCGCGAGGTGACCGAGCGCGAAGACG
CCCGCCTGACCACTCGCCTCAAAGCGGCGCGGTTGCGCCACAACGCCTGCCTGGAAGACATCGACTACCGCAGCCCGCGT
GGCCTGGACAAGGCCATGATCCTGCAACTGGGCGGTGGCCAGTGGCTGCGTGATGGCCTGAACTTGATCATCGGCGGGCC
AACTGGCGTAGGCAAAACCTGGCTCGCCTGCGCGCTGGCCCACAAGGCCTGCCGCGACGGCTACAGCGTGCGTTACCTGC
GCCTGCCGCGCTTGATGGAGGAGCTGGGCCTGGCCCATGGCGACGGCCGCTTCGCCAAACTGATGGCCGGCTACGCCAAG
ACCGACCTGCTGATCCTGGACGACTGGGGCCTGGCACCGTTTACTGCCGCGCGACGACGCGACATGCTTGAGCTGCTGGA
CGACCGCTACGGCAACCGCTCGACACTGGTCACCAGCCAGATGCCGGTGGACAAATGGCATGCGCTAATCGGCGATCCGA
CCTTGGGCGACGCGATCCTCGACCGGCTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAGTCGATGCGCAGACGC
GCAACGAAATTGACGACGGCAGGGACTTCAGACTAA

Protein sequence : 
MLPNPTLDKLQTLRLHGMIKSLGEQHATPDINDLSFDERLGLMVDREVTEREDARLTTRLKAARLRHNACLEDIDYRSPR
GLDKAMILQLGGGQWLRDGLNLIIGGPTGVGKTWLACALAHKACRDGYSVRYLRLPRLMEELGLAHGDGRFAKLMAGYAK
TDLLILDDWGLAPFTAARRRDMLELLDDRYGNRSTLVTSQMPVDKWHALIGDPTLGDAILDRLVHNAYRIELKGESMRRR
ATKLTTAGTSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 3e-41 48
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 3e-41 48
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 3e-41 48
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 4e-36 43