Gene Information

Name : PSPTO_2840 (PSPTO_2840)
Accession : NP_792643.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : ISPsy5, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 3189655 - 3191208 bp
Length : 1554 bp
Strand : +
Note : -

DNA sequence :
ATGCGACCATTGCCCGACAACCTTCCTGACGATCCCGTATTGCTCAAACAGATGCTGCTTGAGAGCTACGAAGCACGCTC
GCGCGAACAGGAAGTTAAAGACGCCTACGCCACTCACATCGTTGATCTCAAAGAGCAGATCAAGCTGCTGCGTGACCGTA
TTTTTGGTCGAAAGTCCGAACAAACCGTCGAGCCTAATACCCCTCAACTTGCCTTGTTCAATGAACCTGAAAGCGAGCCT
ATGCTCCCGGTCGGCGATGCTGATGAGGAAGTAGTTGCTCCTGCGCCACGCCGTGGCAAGCGCAAGCCACTGTCGGCTGA
TCTGCCGCGCATTGAAGTCATCCACGAGCTGCCCGAACACGAACTGACCTGTGCCTGCGGTTGCCGCAAGCATGTCGTCA
GCGAGGAAACCAGCGAGCAACTGGATATCGTGCCGATGCAGATTCGGGTGATCAAACACATCCGCAAAGTCTACGGCTGT
CGTGGCTGTGAGTCGGCACCGGTCACAGCCGGCAAGCCTGCGCAGTTGATTGAAAAGAGCATGGCCAGCCCCAGCGTGTT
GGCCATGCTGCTGACCACCAAGTATGTCGACGGCTTGCCGCTGCATCGTTTTGAAACGGTGCTAAGCCGACATGGCATAG
AAATCCCGCGTCAAACGTTGGCCCGCTGGATTATCCAGTGCGGCGAACATTTGCAGCCGCTGTTAAATCTGATGCGTGAT
CGATTGCTGGAAAGCCCGGTCATCCACTGTGACGAAACCCGCGTTCAGGTACTGAAAGAACCAGATCGAGACCCGACCAG
CCAATCCTGGATGTGGGTACAGGCCAGCGGGCCTCCAGATCATAAAGTCGTATTGTTCGACTACACTTCCAGCCGCGCGC
AGGACGTACCGTTACGGCTGCTGGAAAGTTATCGCGGCTATGTGATGACTGATGATTACGCGGGCTATAACGCGCTGGCG
TTACAACCGGGCGTGGAGCGCTTGGCGTGTATGGCCCATGCGCGGCGCAAATTTGTCGAAGCACAAAAAGTGCAACCTAA
GGGCAAGACCGGGCGTGCCGATATCGCGCTGACGATGATCAATAAGCTGTACGGTATCGAGCGCGAATTGAAAGACGGCA
GCGACGAACAGCGCTTTACCGGTCGGCAGGAGAAAAGCCTGCCAATCTTGGCTCAGTTGAAAAGCTGGCTGGATAAAACT
CAGTCCCACGTGACGCCGCAAAGCGTGCTGGGCAAGGCAGTTGGTTATCTGGCGAATAACTGGAGTCGGCTGAAGCGTTA
CGTGGAAGCCGGCTTTTTACCGATCGACAACAACCCGGCAGAGCGCGCAATAAAGCCGTTTGTTATTGGGCGCAAAGCCT
GGCTGTTCAGCGACACGCCTAAAGGCGCCACCGCCAGTGCACAGATCTATAGCTTGGTCGAGACCGCCAAGGTCAACGGC
CAGGAGCCCTATACGTGGCTGCGCCACGTACTGGAGAGGTTGCCACTTGCGCAGTCGGTGGCCGACTATGAGGCGTTGCT
GCCGTGGAACTGCTCACCGGAAATGCCAAGATAA

Protein sequence :
MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLKEQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEP
MLPVGDADEEVVAPAPRRGKRKPLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC
RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQTLARWIIQCGEHLQPLLNLMRD
RLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQASGPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALA
LQPGVERLACMAHARRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQLKSWLDKT
QSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVETAKVNG
QEPYTWLRHVLERLPLAQSVADYEALLPWNCSPEMPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71494.1 unknown Not tested Hrp PAI Protein 0.0 90