Gene Information

Name : tpx (PSPTO_2752)
Accession : NP_792558.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 3061058 - 3061558 bp
Length : 501 bp
Strand : +
Note : similar to SP:P37901, SP:P14250, and PID:148571; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P37901, SP:P14250, and PID:148571, identified by sequence similarity, putative

DNA sequence : 
ATGGCTCAAGTGACCCTTAAAGGCGGCCCCGTTCAAGTCAATGGCACCCTGCCTGAAGTCGGCAGCAAGGCAGCAGCCTT
CACGCTGGTGGGCGAAGGTCTTGCTGACAAGACCCTGGCTGACTTCGCTGGCAAGCGCAAGGTGCTGAACATCTTCCCGA
GCGTCGATACTCCGACCTGCGCAACATCGGTACGTAAGTTCAACGCCCAGGCCAACGAGCTGAACAACGCCGTTGTGTTG
TGCATCTCCGCCGACCTGCCGTTCGCCCAGGCACGCTTCTGCGGCTCCGAAGGTCTGGAAAACGTCAAGAACCTGTCTTC
GTTCCGCAGTGCTGATTTCAGCGAGCATTACGGCGTTGCCATTGCCGACGGTCCGTTGAAGGGCCTGACCGCTCGCGCAG
TGGTTGTGCTGGACGAAAACGACACTGTGCTGCACAGCGAACTGGTATCGGAAATTGCCGAAGAGCCAAATTACGACGCT
GCACTGGCTGTACTGAAGTAA

Protein sequence : 
MAQVTLKGGPVQVNGTLPEVGSKAAAFTLVGEGLADKTLADFAGKRKVLNIFPSVDTPTCATSVRKFNAQANELNNAVVL
CISADLPFAQARFCGSEGLENVKNLSSFRSADFSEHYGVAIADGPLKGLTARAVVVLDENDTVLHSELVSEIAEEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-37 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-37 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-37 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-37 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx NP_792558.1 thiol peroxidase VFG0087 Protein 5e-38 48